Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-156 |
| Cow position: | chr21:27708807-27708963 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-197 |
| Cow position: | chr21:3615337-3615534 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-217 |
| Cow position: | chr21:2716636-2716421 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 181, 17 |
| Conread position: | 1-221 |
| Cow position: | chr21:33251437-33251657 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-316 |
| Cow position: | chr21:4222642-4222333 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 133 |
| Conread position: | 1-339 |
| Cow position: | chr21:3426530-3426868 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 1-367 |
| Cow position: | chr21:10850125-10850490 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-370 |
| Cow position: | chr21:2883703-2883334 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 1-374 |
| Cow position: | chr21:31559609-31559238 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 1-379 |
| Cow position: | chr21:27282432-27282808 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 223 |
| Conread position: | 1-379 |
| Cow position: | chr21:37044958-37045333 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-380 |
| Cow position: | chr21:39425108-39425487 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 1-381 |
| Cow position: | chr21:2788946-2788568 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 1-381 |
| Cow position: | chr21:34293064-34293440 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr21:1292132-1291754 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr21:4090696-4091086 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr21:4456872-4457263 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-393 |
| Cow position: | chr21:13123954-13123569 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 1-406 |
| Cow position: | chr21:4589945-4589541 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 1-413 |
| Cow position: | chr21:8678315-8677903 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-420 |
| Cow position: | chr21:3778811-3779231 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-425 |
| Cow position: | chr21:4076890-4077307 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 1-431 |
| Cow position: | chr21:2416281-2416694 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 1-431 |
| Cow position: | chr21:6339611-6340048 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr21:11453611-11453174 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr21:11505632-11506078 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr21:26638418-26637983 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 17 |
| Conread position: | 2-380 |
| Cow position: | chr21:2674582-2674188 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 4-393 |
| Cow position: | chr21:2530079-2529691 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 5-372 |
| Cow position: | chr21:40271628-40271261 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 5-393 |
| Cow position: | chr21:35596417-35596803 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 5-444 |
| Cow position: | chr21:23860832-23861265 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 6-477 |
| Cow position: | chr21:4183574-4184029 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 6-502 |
| Cow position: | chr21:23811926-23812417 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 7-392 |
| Cow position: | chr21:6699515-6699147 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 9-380 |
| Cow position: | chr21:30561855-30562226 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 10-414 |
| Cow position: | chr21:7267488-7267074 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 10-502 |
| Cow position: | chr21:9891650-9892152 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 8 |
| Conread position: | 18-192 |
| Cow position: | chr21:26818958-26818785 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 18-374 |
| Cow position: | chr21:48116172-48116519 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 32-498 |
| Cow position: | chr21:2541336-2540873 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 56-393 |
| Cow position: | chr21:3798270-3797934 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 75-415 |
| Cow position: | chr21:4086919-4087261 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 80-425 |
| Cow position: | chr21:2502019-2502361 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 31 |
| Conread position: | 120-502 |
| Cow position: | chr21:28966-29313 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 143-502 |
| Cow position: | chr21:30226206-30226557 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 166-381 |
| Cow position: | chr21:3615531-3615736 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 211-507 |
| Cow position: | chr21:359289-359582 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 43 |
| Conread position: | 232-472 |
| Cow position: | chr21:9870022-9870255 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 253-387 |
| Cow position: | chr21:2716421-2716286 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 123 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 130, 0 |
Show alignments to all cow chromosomes.