Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-170 |
| Cow position: | chr22:6985127-6985296 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-202 |
| Cow position: | chr22:45880236-45880039 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 1-325 |
| Cow position: | chr22:36274682-36275005 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 1-335 |
| Cow position: | chr22:24949702-24950036 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-372 |
| Cow position: | chr22:560833-560462 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-374 |
| Cow position: | chr22:18816509-18816141 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 1-374 |
| Cow position: | chr22:36183631-36184001 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-376 |
| Cow position: | chr22:37131522-37131880 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-380 |
| Cow position: | chr22:10546517-10546896 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-380 |
| Cow position: | chr22:15314076-15313701 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 1-380 |
| Cow position: | chr22:19143827-19143448 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr22:31313213-31313590 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr22:34168204-34168582 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr22:36861658-36861279 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr22:39469647-39469272 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-381 |
| Cow position: | chr22:1319269-1319649 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 1-381 |
| Cow position: | chr22:36736635-36737011 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 1-388 |
| Cow position: | chr22:5233433-5233046 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-393 |
| Cow position: | chr22:17328867-17328475 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-393 |
| Cow position: | chr22:39882304-39881912 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 114 |
| Conread position: | 1-393 |
| Cow position: | chr22:46547792-46547400 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-393 |
| Cow position: | chr22:46853214-46853606 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-395 |
| Cow position: | chr22:327284-326904 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-408 |
| Cow position: | chr22:44475127-44475513 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-414 |
| Cow position: | chr22:5672609-5673024 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 1-427 |
| Cow position: | chr22:35672483-35672051 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 1-430 |
| Cow position: | chr22:536973-537409 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 1-431 |
| Cow position: | chr22:1878664-1879102 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr22:3278481-3278047 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 1-431 |
| Cow position: | chr22:27309901-27309464 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-433 |
| Cow position: | chr22:20240969-20240531 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 1-446 |
| Cow position: | chr22:36533865-36533421 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 17 |
| Conread position: | 1-500 |
| Cow position: | chr22:13917375-13917873 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 3-412 |
| Cow position: | chr22:32348104-32347707 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 4-253 |
| Cow position: | chr22:1293621-1293372 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 4-268 |
| Cow position: | chr22:27386556-27386292 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 4-380 |
| Cow position: | chr22:44933855-44934230 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 4-431 |
| Cow position: | chr22:10909963-10909524 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 4-431 |
| Cow position: | chr22:44489762-44490194 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 4-502 |
| Cow position: | chr22:3306857-3306361 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 4-502 |
| Cow position: | chr22:8136321-8135837 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 15 |
| Conread position: | 4-506 |
| Cow position: | chr22:1270635-1270174 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 5-374 |
| Cow position: | chr22:21589203-21589569 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 6-392 |
| Cow position: | chr22:293280-292907 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 6-392 |
| Cow position: | chr22:298454-298079 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 6-393 |
| Cow position: | chr22:158025-157642 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 123 |
| Conread position: | 6-458 |
| Cow position: | chr22:1321489-1321913 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 7-421 |
| Cow position: | chr22:15851213-15851614 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 7-426 |
| Cow position: | chr22:1048289-1048702 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 100 |
| Conread position: | 7-500 |
| Cow position: | chr22:11030838-11031330 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 11-393 |
| Cow position: | chr22:42771359-42771719 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 22-221 |
| Cow position: | chr22:13772872-13773066 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 23-431 |
| Cow position: | chr22:44353061-44352664 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 30-380 |
| Cow position: | chr22:27283946-27284282 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 32-343 |
| Cow position: | chr22:32485448-32485139 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 32-431 |
| Cow position: | chr22:6020566-6020972 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 102 |
| Conread position: | 35-506 |
| Cow position: | chr22:44609507-44609961 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 52 |
| Conread position: | 41-500 |
| Cow position: | chr22:6503763-6503308 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 67-502 |
| Cow position: | chr22:41419755-41419331 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 87-457 |
| Cow position: | chr22:117888-117514 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 158-506 |
| Cow position: | chr22:1283621-1283282 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 185 |
| Conread position: | 181-502 |
| Cow position: | chr22:23853383-23853701 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 185-393 |
| Cow position: | chr22:38938027-38937819 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-431 |
| Cow position: | chr22:37266072-37266280 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 289-393 |
| Cow position: | chr22:31936654-31936758 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-393 |
| Cow position: | chr22:24950262-24950362 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.