Cow genome map


           Conread name:
           LyN1-MLN01A120092
        

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 17
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 133
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               381, 17
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               451, 17
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 95
               

               Conread position:
               4-380
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               4-479
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               4-499
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               5-179
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 126
               

               Conread position:
               5-380
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               5-381
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               5-393
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               11-502
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               32-393
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               33-503
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               54-498
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               120-502
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 12
               

               Conread position:
               121-502
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 13
               

               Conread position:
               134-461
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 178
               

               Conread position:
               152-474
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               83, 273
               

               Conread position:
               168-431
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               189-427
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               193, 81
               

               Conread position:
               189-502
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               195-381
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-443
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               259-393
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-481
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               293-424
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               323-475
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 96
               

               Conread position:
               337-481
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 0
               
Show alignments to all cow chromosomes.