Cow genome map
Conread name: | LyN1-MLN01A120092 |
Conread position: | 1-228 |
Cow position: | chr28:24652208-24652427 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 18, 93 |
Conread position: | 1-361 |
Cow position: | chr28:17667597-17667237 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-367 |
Cow position: | chr28:22261234-22260868 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-368 |
Cow position: | chr28:1504768-1505135 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 1-374 |
Cow position: | chr28:1814951-1814578 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 1-379 |
Cow position: | chr28:8378481-8378863 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr28:1953047-1953425 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 96 |
Conread position: | 1-380 |
Cow position: | chr28:2083521-2083891 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 17 |
Conread position: | 1-380 |
Cow position: | chr28:14705755-14705376 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr28:15378075-15377697 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 133 |
Conread position: | 1-380 |
Cow position: | chr28:17388398-17388777 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr28:32792462-32792085 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-387 |
Cow position: | chr28:9137132-9136749 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 17 |
Conread position: | 1-393 |
Cow position: | chr28:1387478-1387092 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-393 |
Cow position: | chr28:2724974-2724584 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-393 |
Cow position: | chr28:9155368-9154977 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 17 |
Conread position: | 1-393 |
Cow position: | chr28:9954053-9954441 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-393 |
Cow position: | chr28:13440960-13440568 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-425 |
Cow position: | chr28:7001905-7002332 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 133 |
Conread position: | 1-431 |
Cow position: | chr28:6780411-6779983 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 381, 17 |
Conread position: | 1-431 |
Cow position: | chr28:7822174-7822611 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-431 |
Cow position: | chr28:24587350-24587788 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 131 |
Conread position: | 1-434 |
Cow position: | chr28:8721532-8721098 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 131 |
Conread position: | 1-506 |
Cow position: | chr28:5812626-5813104 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 451, 17 |
Conread position: | 3-245 |
Cow position: | chr28:26426355-26426117 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 184 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 14, 95 |
Conread position: | 4-380 |
Cow position: | chr28:5114880-5114516 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 130 |
Conread position: | 4-431 |
Cow position: | chr28:14750468-14750900 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 72 |
Conread position: | 4-479 |
Cow position: | chr28:34648863-34649336 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 76 |
Conread position: | 4-499 |
Cow position: | chr28:10619190-10618712 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 95 |
Conread position: | 5-179 |
Cow position: | chr28:22233768-22233595 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 14, 126 |
Conread position: | 5-380 |
Cow position: | chr28:12410299-12409930 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 5-381 |
Cow position: | chr28:7901272-7901658 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 14 |
Conread position: | 5-393 |
Cow position: | chr28:2591837-2592223 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 6-380 |
Cow position: | chr28:13459893-13460265 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 11-502 |
Cow position: | chr28:21358933-21359417 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 117 |
Conread position: | 32-393 |
Cow position: | chr28:4380890-4380536 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 33-503 |
Cow position: | chr28:21325755-21326196 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 48 |
Conread position: | 54-498 |
Cow position: | chr28:7790317-7789874 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 81 |
Conread position: | 120-502 |
Cow position: | chr28:2989679-2989291 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 12 |
Conread position: | 121-502 |
Cow position: | chr28:5797470-5797849 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 13 |
Conread position: | 134-461 |
Cow position: | chr28:17324301-17323965 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 178 |
Conread position: | 152-474 |
Cow position: | chr28:10463085-10462762 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 83, 273 |
Conread position: | 168-431 |
Cow position: | chr28:485479-485209 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 0 |
Conread position: | 189-427 |
Cow position: | chr28:22233293-22233050 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 187 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 193, 81 |
Conread position: | 189-502 |
Cow position: | chr28:10071089-10071395 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 195-381 |
Cow position: | chr28:13490261-13490447 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 154 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 222-443 |
Cow position: | chr28:6539124-6538894 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 179 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 259-393 |
Cow position: | chr28:24652942-24652808 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 118 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 279-481 |
Cow position: | chr28:11357519-11357321 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 293-424 |
Cow position: | chr28:2886515-2886644 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 323-475 |
Cow position: | chr28:7817377-7817528 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 69, 96 |
Conread position: | 337-481 |
Cow position: | chr28:5764499-5764641 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.