Cow genome map
Conread name: | LyN1-MLN01A120092 |
Conread position: | 1-141 |
Cow position: | chr29:43791063-43791202 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 18, 128 |
Conread position: | 1-223 |
Cow position: | chr29:21246452-21246674 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 174 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 18, 98 |
Conread position: | 1-334 |
Cow position: | chr29:32315923-32316256 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-374 |
Cow position: | chr29:6266611-6266246 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 115 |
Conread position: | 1-374 |
Cow position: | chr29:14585810-14586177 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 133 |
Conread position: | 1-374 |
Cow position: | chr29:40503096-40502727 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 80 |
Conread position: | 1-379 |
Cow position: | chr29:15894968-15894590 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-380 |
Cow position: | chr29:2099727-2100106 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr29:2689786-2690161 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-380 |
Cow position: | chr29:7431333-7430958 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr29:7840679-7841057 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-380 |
Cow position: | chr29:20251042-20251420 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr29:25932662-25932283 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 133 |
Conread position: | 1-380 |
Cow position: | chr29:27981035-27980658 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 132 |
Conread position: | 1-380 |
Cow position: | chr29:32539693-32540071 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-380 |
Cow position: | chr29:35296757-35297135 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 98 |
Conread position: | 1-380 |
Cow position: | chr29:39079823-39079451 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 97 |
Conread position: | 1-381 |
Cow position: | chr29:10848226-10847826 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-387 |
Cow position: | chr29:16770011-16770392 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 111 |
Conread position: | 1-387 |
Cow position: | chr29:43322442-43322823 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 133 |
Conread position: | 1-393 |
Cow position: | chr29:5957485-5957878 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-393 |
Cow position: | chr29:11049165-11049552 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 1-393 |
Cow position: | chr29:21543482-21543095 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 136 |
Conread position: | 1-393 |
Cow position: | chr29:27040881-27040498 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 92 |
Conread position: | 1-393 |
Cow position: | chr29:35196555-35196938 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 90 |
Conread position: | 1-430 |
Cow position: | chr29:610729-610294 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-431 |
Cow position: | chr29:670174-669738 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 1-431 |
Cow position: | chr29:19884952-19885389 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 132 |
Conread position: | 1-431 |
Cow position: | chr29:27250452-27250023 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 3-379 |
Cow position: | chr29:43366112-43365742 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 15 |
Conread position: | 18-393 |
Cow position: | chr29:10648351-10647977 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 18-414 |
Cow position: | chr29:803450-803061 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 27 |
Conread position: | 23-431 |
Cow position: | chr29:18857039-18856624 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 111 |
Conread position: | 32-367 |
Cow position: | chr29:42650199-42650534 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 100 |
Conread position: | 34-207 |
Cow position: | chr29:31181040-31181212 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 41-405 |
Cow position: | chr29:2750482-2750135 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 40 |
Conread position: | 195-380 |
Cow position: | chr29:31181492-31181676 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 146 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 205-479 |
Cow position: | chr29:24709162-24708892 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 193 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 102, 37 |
Conread position: | 254-502 |
Cow position: | chr29:14086313-14086068 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 41 |
Conread position: | 258-507 |
Cow position: | chr29:5983070-5982820 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 186 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 21, 167 |
Show alignments to all cow chromosomes.