Cow genome map
| Conread name: | LyN1-MLN01A120092 | 
| Conread position: | 1-123 | 
| Cow position: | chr3:57901016-57901139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 1-203 | 
| Cow position: | chr3:4285686-4285888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-205 | 
| Cow position: | chr3:63005348-63005142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 1-229 | 
| Cow position: | chr3:14634311-14634084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 18, 114 | 
| Conread position: | 1-252 | 
| Cow position: | chr3:37968881-37969130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-305 | 
| Cow position: | chr3:57856537-57856841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-312 | 
| Cow position: | chr3:46678112-46677800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 294, 17 | 
| Conread position: | 1-320 | 
| Cow position: | chr3:17828849-17828530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-322 | 
| Cow position: | chr3:32146290-32145971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-343 | 
| Cow position: | chr3:5047384-5047042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-348 | 
| Cow position: | chr3:23291605-23291256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 292, 131 | 
| Conread position: | 1-349 | 
| Cow position: | chr3:15989235-15988879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 132 | 
| Conread position: | 1-357 | 
| Cow position: | chr3:50915106-50915462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 34 | 
| Conread position: | 1-361 | 
| Cow position: | chr3:18811303-18811663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 18 | 
| Conread position: | 1-368 | 
| Cow position: | chr3:5883341-5883706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 133 | 
| Conread position: | 1-369 | 
| Cow position: | chr3:70083845-70083486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 105 | 
| Conread position: | 1-373 | 
| Cow position: | chr3:53515419-53515785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 18 | 
| Conread position: | 1-374 | 
| Cow position: | chr3:19757159-19756786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-374 | 
| Cow position: | chr3:64017563-64017192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 17 | 
| Conread position: | 1-379 | 
| Cow position: | chr3:56340623-56340249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:594379-594755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 77 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:2917263-2917640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:5995896-5995518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:18542607-18542229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 68 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:21182884-21182508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 75 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:34031098-34030720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 133 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:40823189-40823566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 17 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:41211937-41211558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 134 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:48061030-48060653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:49614176-49613798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 17 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:66619979-66620351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 97 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:72629869-72630249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-380 | 
| Cow position: | chr3:78027610-78027231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-381 | 
| Cow position: | chr3:66638540-66638920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 17 | 
| Conread position: | 1-390 | 
| Cow position: | chr3:3522815-3523210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 140 | 
| Conread position: | 1-391 | 
| Cow position: | chr3:5829828-5829439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 134 | 
| Conread position: | 1-391 | 
| Cow position: | chr3:57499718-57499356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 17 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:472334-472724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:2633729-2634112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:2653908-2654294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 17 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:31354456-31354073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:36117476-36117855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 137 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:59861166-59861558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:64028285-64027894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 132 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:66119457-66119847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:77474560-77474954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 103 | 
| Conread position: | 1-414 | 
| Cow position: | chr3:26949315-26949725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 45 | 
| Conread position: | 1-414 | 
| Cow position: | chr3:45869409-45869003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 382, 17 | 
| Conread position: | 1-420 | 
| Cow position: | chr3:57484927-57484510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 133 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:7168596-7169022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 75 | 
| Conread position: | 1-425 | 
| Cow position: | chr3:42580165-42579745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 93 | 
| Conread position: | 1-431 | 
| Cow position: | chr3:7158930-7158496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 47 | 
| Conread position: | 1-431 | 
| Cow position: | chr3:22335693-22336125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 134 | 
| Conread position: | 1-431 | 
| Cow position: | chr3:47081857-47081421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 18 | 
| Conread position: | 1-431 | 
| Cow position: | chr3:47179403-47178968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 17 | 
| Conread position: | 1-431 | 
| Cow position: | chr3:64650432-64650863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 77 | 
| Conread position: | 1-433 | 
| Cow position: | chr3:18463785-18463362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 132 | 
| Conread position: | 1-487 | 
| Cow position: | chr3:4027074-4027558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 17 | 
| Conread position: | 1-500 | 
| Cow position: | chr3:48231194-48230708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 17 | 
| Conread position: | 1-502 | 
| Cow position: | chr3:29594997-29595491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 42 | 
| Conread position: | 1-506 | 
| Cow position: | chr3:64358365-64357865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 62 | 
| Conread position: | 1-527 | 
| Cow position: | chr3:31898171-31897651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 407, 17 | 
| Conread position: | 2-380 | 
| Cow position: | chr3:42432032-42432410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 132 | 
| Conread position: | 2-380 | 
| Cow position: | chr3:69933195-69933573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 132 | 
| Conread position: | 2-502 | 
| Cow position: | chr3:6685262-6685746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 17 | 
| Conread position: | 3-431 | 
| Cow position: | chr3:15178113-15178542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 35 | 
| Conread position: | 3-444 | 
| Cow position: | chr3:54783343-54783787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 113 | 
| Conread position: | 4-393 | 
| Cow position: | chr3:207357-206969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 14 | 
| Conread position: | 4-412 | 
| Cow position: | chr3:56097339-56097730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 15, 53 | 
| Conread position: | 4-480 | 
| Cow position: | chr3:36098901-36098440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 53 | 
| Conread position: | 5-393 | 
| Cow position: | chr3:9716618-9717002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 121 | 
| Conread position: | 5-411 | 
| Cow position: | chr3:58947261-58947665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 129 | 
| Conread position: | 5-431 | 
| Cow position: | chr3:46861499-46861066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 130 | 
| Conread position: | 6-317 | 
| Cow position: | chr3:17775904-17776201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 113, 87 | 
| Conread position: | 18-367 | 
| Cow position: | chr3:19943879-19944216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 58 | 
| Conread position: | 18-380 | 
| Cow position: | chr3:18859238-18859593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 114 | 
| Conread position: | 18-430 | 
| Cow position: | chr3:6782206-6782620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 364, 108 | 
| Conread position: | 19-425 | 
| Cow position: | chr3:3054416-3054821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 117 | 
| Conread position: | 23-380 | 
| Cow position: | chr3:56321140-56321494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 23-431 | 
| Cow position: | chr3:66891138-66890726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 366, 109 | 
| Conread position: | 29-502 | 
| Cow position: | chr3:19802489-19802948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 30-478 | 
| Cow position: | chr3:34093613-34093171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 382, 24 | 
| Conread position: | 30-502 | 
| Cow position: | chr3:52864641-52864170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 11 | 
| Conread position: | 31-238 | 
| Cow position: | chr3:13274106-13273901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 148, 84 | 
| Conread position: | 32-380 | 
| Cow position: | chr3:23214229-23213883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 32-415 | 
| Cow position: | chr3:32842598-32842235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 73 | 
| Conread position: | 32-425 | 
| Cow position: | chr3:26822661-26822282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 351, 64 | 
| Conread position: | 36-393 | 
| Cow position: | chr3:3806180-3806519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 48-380 | 
| Cow position: | chr3:14439911-14439582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 56-506 | 
| Cow position: | chr3:39326576-39327019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 6 | 
| Conread position: | 60-411 | 
| Cow position: | chr3:77423541-77423882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 64-425 | 
| Cow position: | chr3:49677651-49678010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 84-479 | 
| Cow position: | chr3:45775205-45774822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 53 | 
| Conread position: | 99-431 | 
| Cow position: | chr3:68700070-68699736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 283, 35 | 
| Conread position: | 99-431 | 
| Cow position: | chr3:68873848-68873518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 283, 35 | 
| Conread position: | 211-502 | 
| Cow position: | chr3:63004723-63004445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 166 | 
| Conread position: | 213-393 | 
| Cow position: | chr3:29331265-29331085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 221-506 | 
| Cow position: | chr3:14632678-14632399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 231-381 | 
| Cow position: | chr3:53713078-53713228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 243-431 | 
| Cow position: | chr3:40340070-40339875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 290-437 | 
| Cow position: | chr3:63241688-63241542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 362-507 | 
| Cow position: | chr3:66990924-66991067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
Show alignments to all cow chromosomes.
