Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-213 |
| Cow position: | chr4:31668919-31669127 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 1-340 |
| Cow position: | chr4:4905759-4906090 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-363 |
| Cow position: | chr4:528598-528960 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-374 |
| Cow position: | chr4:3961197-3961569 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 1-380 |
| Cow position: | chr4:12241614-12241234 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:27333048-27333419 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:32211772-32212151 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr4:36895979-36896351 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 1-380 |
| Cow position: | chr4:41331046-41331422 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 1-380 |
| Cow position: | chr4:43320031-43319663 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:43880714-43881092 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:44724688-44725067 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:45049693-45049315 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr4:47764565-47764187 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr4:57979236-57979611 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 1-387 |
| Cow position: | chr4:16056209-16056593 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 1-391 |
| Cow position: | chr4:66179383-66178993 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-391 |
| Cow position: | chr4:66925610-66925992 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 1-393 |
| Cow position: | chr4:11618464-11618847 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr4:13547633-13548026 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-413 |
| Cow position: | chr4:13492181-13492587 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-424 |
| Cow position: | chr4:30307847-30307425 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 1-425 |
| Cow position: | chr4:355516-355939 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 1-430 |
| Cow position: | chr4:101324-100893 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 1-430 |
| Cow position: | chr4:6269023-6268591 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr4:158120-158557 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-431 |
| Cow position: | chr4:1931018-1930582 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 1-431 |
| Cow position: | chr4:3125386-3125837 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-431 |
| Cow position: | chr4:5879776-5880207 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 1-443 |
| Cow position: | chr4:602599-603049 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-478 |
| Cow position: | chr4:8598543-8598078 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 1-502 |
| Cow position: | chr4:1464323-1463835 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 1-502 |
| Cow position: | chr4:21338387-21337903 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 1-502 |
| Cow position: | chr4:28830645-28831126 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 1-506 |
| Cow position: | chr4:46663802-46664292 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 1-506 |
| Cow position: | chr4:60264959-60264460 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 4-380 |
| Cow position: | chr4:47717999-47717623 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 6-400 |
| Cow position: | chr4:22471797-22472172 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 6-479 |
| Cow position: | chr4:11393726-11393264 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 23-391 |
| Cow position: | chr4:40824617-40824258 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 25-374 |
| Cow position: | chr4:41119643-41119991 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 60-457 |
| Cow position: | chr4:34185214-34184830 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 67-393 |
| Cow position: | chr4:61256568-61256888 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 84-414 |
| Cow position: | chr4:15193739-15194071 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 146-408 |
| Cow position: | chr4:11384708-11384967 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 161-431 |
| Cow position: | chr4:26749116-26748866 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 199-431 |
| Cow position: | chr4:4415885-4416123 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 205-381 |
| Cow position: | chr4:10408486-10408658 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 211-402 |
| Cow position: | chr4:51044114-51043927 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 169, 46 |
| Conread position: | 215-380 |
| Cow position: | chr4:41954292-41954458 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 245-431 |
| Cow position: | chr4:18190255-18190447 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 137, 50 |
Show alignments to all cow chromosomes.