Cow genome map
| Conread name: | LyN1-MLN01A120092 |
| Conread position: | 1-213 |
| Cow position: | chr6:50497617-50497405 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-232 |
| Cow position: | chr6:68362478-68362250 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-316 |
| Cow position: | chr6:57870162-57869847 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-361 |
| Cow position: | chr6:5951395-5951045 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-361 |
| Cow position: | chr6:28274825-28275183 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 1-374 |
| Cow position: | chr6:6566454-6566819 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 1-374 |
| Cow position: | chr6:8761459-8761091 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 1-374 |
| Cow position: | chr6:17045900-17046269 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-374 |
| Cow position: | chr6:65841436-65841798 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-379 |
| Cow position: | chr6:13276644-13277019 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 1-380 |
| Cow position: | chr6:331625-331249 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-380 |
| Cow position: | chr6:2554549-2554926 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-380 |
| Cow position: | chr6:3278109-3277730 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr6:15141334-15140960 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 1-380 |
| Cow position: | chr6:15280701-15280332 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 1-380 |
| Cow position: | chr6:24238906-24239285 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr6:27169418-27169801 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 1-380 |
| Cow position: | chr6:27530161-27529787 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 1-380 |
| Cow position: | chr6:30275337-30274959 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-380 |
| Cow position: | chr6:33459706-33460083 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 1-380 |
| Cow position: | chr6:34127190-34127573 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 1-380 |
| Cow position: | chr6:34893168-34892786 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 1-380 |
| Cow position: | chr6:55544485-55544107 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 1-380 |
| Cow position: | chr6:58409071-58408692 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 1-393 |
| Cow position: | chr6:19453764-19454148 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 1-393 |
| Cow position: | chr6:27469095-27469480 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-393 |
| Cow position: | chr6:36525884-36526279 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-414 |
| Cow position: | chr6:26671022-26670598 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-421 |
| Cow position: | chr6:30478933-30479360 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 1-427 |
| Cow position: | chr6:13846889-13847305 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 1-430 |
| Cow position: | chr6:2374545-2374978 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 1-431 |
| Cow position: | chr6:7141630-7141209 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-431 |
| Cow position: | chr6:13103899-13104336 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 1-431 |
| Cow position: | chr6:13943752-13944185 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-431 |
| Cow position: | chr6:17598438-17598001 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 1-431 |
| Cow position: | chr6:43617558-43617993 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 1-431 |
| Cow position: | chr6:44150716-44150278 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 1-431 |
| Cow position: | chr6:68026623-68027070 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 1-443 |
| Cow position: | chr6:65822285-65821834 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 1-446 |
| Cow position: | chr6:10558815-10558371 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 17 |
| Conread position: | 1-453 |
| Cow position: | chr6:65900077-65899603 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 254 |
| Conread position: | 1-478 |
| Cow position: | chr6:35420739-35420294 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-500 |
| Cow position: | chr6:38232117-38232615 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 1-502 |
| Cow position: | chr6:37115980-37116474 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 2-369 |
| Cow position: | chr6:33388676-33389050 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 124 |
| Conread position: | 3-446 |
| Cow position: | chr6:37642244-37642666 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 4-380 |
| Cow position: | chr6:35876874-35876498 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 4-425 |
| Cow position: | chr6:3889635-3889218 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 4-458 |
| Cow position: | chr6:32330948-32330499 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 5-413 |
| Cow position: | chr6:40554747-40554334 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 7-431 |
| Cow position: | chr6:59919431-59919008 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 9-335 |
| Cow position: | chr6:21971523-21971861 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 10-318 |
| Cow position: | chr6:42927236-42927540 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-371 |
| Cow position: | chr6:25214110-25214469 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 18-384 |
| Cow position: | chr6:41552881-41553234 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 25-379 |
| Cow position: | chr6:65880733-65881086 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 27-478 |
| Cow position: | chr6:7179821-7179383 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 84 |
| Conread position: | 32-422 |
| Cow position: | chr6:11277817-11277439 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 62-431 |
| Cow position: | chr6:3148908-3149281 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 41 |
| Conread position: | 71-431 |
| Cow position: | chr6:39908441-39908805 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 63 |
| Conread position: | 116-414 |
| Cow position: | chr6:40315014-40315299 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 18 |
| Conread position: | 116-479 |
| Cow position: | chr6:6476525-6476173 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 160-431 |
| Cow position: | chr6:40251663-40251941 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 229-506 |
| Cow position: | chr6:10641229-10641504 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 66 |
| Conread position: | 232-476 |
| Cow position: | chr6:43608286-43608047 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 251-479 |
| Cow position: | chr6:52805122-52805342 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 264-393 |
| Cow position: | chr6:12650845-12650716 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-380 |
| Cow position: | chr6:40275209-40275308 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.