Cow genome map

Conread name: LyN1-MLN01C050017

Conread position: 1-168
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 0

Conread position: 1-170
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-203
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 26

Conread position: 1-203
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 134

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 215, 20

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 57, 25

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 71

Conread position: 1-248
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 189

Conread position: 1-248
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 196

Conread position: 1-249
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 100

Conread position: 2-193
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 41

Conread position: 2-210
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 165

Conread position: 2-217
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 87

Conread position: 2-228
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 196

Conread position: 2-236
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 40

Conread position: 2-239
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 107

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 7, 50

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 2-248
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 100

Conread position: 2-248
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 98

Conread position: 2-266
Cow position:
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 224

Conread position: 2-266
Cow position:
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 220

Conread position: 3-176
Cow position:
Alignm length: 179
Alignm identity: 149
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 6, 0

Conread position: 3-246
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 163

Conread position: 3-246
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 155

Conread position: 5-228
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 134, 22

Conread position: 5-235
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 17

Conread position: 5-236
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 24

Conread position: 5-243
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 17

Conread position: 5-243
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 18

Conread position: 5-244
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 160

Conread position: 5-244
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 5-248
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 15

Conread position: 5-248
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 86

Conread position: 5-248
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 18

Conread position: 5-250
Cow position:
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 233

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 19, 73

Conread position: 6-230
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 6-245
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 84

Conread position: 7-230
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 16, 66

Conread position: 7-246
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 30

Conread position: 7-250
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 96

Conread position: 7-266
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 70

Conread position: 8-199
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 15

Conread position: 8-230
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 93

Conread position: 8-236
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 14

Conread position: 8-248
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 143

Conread position: 8-248
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 126, 22

Conread position: 8-266
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 131, 52

Conread position: 9-165
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 9-242
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 21, 202

Conread position: 9-248
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 64

Conread position: 9-248
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 125, 32

Conread position: 9-251
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 72

Conread position: 9-266
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 10-222
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 98, 22

Conread position: 10-230
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 19

Conread position: 10-236
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 66, 90

Conread position: 10-239
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 18

Conread position: 10-240
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 30

Conread position: 10-247
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 69

Conread position: 10-248
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 10-266
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 10-266
Cow position:
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 106

Conread position: 11-190
Cow position:
Alignm length: 182
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 11-208
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 120

Conread position: 11-224
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 123

Conread position: 11-255
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 11

Conread position: 11-259
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 115

Conread position: 11-262
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 131, 148

Conread position: 12-164
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 12-244
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 12-248
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 86

Conread position: 12-248
Cow position:
Alignm length: 242
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 23

Conread position: 12-248
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 200

Conread position: 12-261
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 61, 76

Conread position: 12-266
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 17, 60

Conread position: 13-176
Cow position:
Alignm length: 173
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 13-236
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 0

Conread position: 13-239
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 116

Conread position: 13-241
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 72

Conread position: 13-243
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 13-244
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 53, 136

Conread position: 13-248
Cow position:
Alignm length: 241
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 13-248
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 125

Conread position: 13-255
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 192, 118

Conread position: 13-266
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 14

Conread position: 14-227
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 117, 15

Conread position: 14-247
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 178

Conread position: 15-167
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 115

Conread position: 15-230
Cow position:
Alignm length: 220
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 16-198
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 23

Conread position: 16-242
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 55, 30

Conread position: 17-228
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 160

Conread position: 17-243
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 65

Conread position: 17-245
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 205

Conread position: 17-245
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 17-248
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 17-255
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 125, 12

Conread position: 18-226
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 59

Conread position: 18-236
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 119

Conread position: 18-236
Cow position:
Alignm length: 239
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 18-241
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 65

Conread position: 18-248
Cow position:
Alignm length: 237
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 18-248
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 226

Conread position: 18-248
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 18-263
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 104, 50

Conread position: 19-245
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 21-235
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 21-247
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 86, 30

Conread position: 22-204
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 14

Conread position: 22-263
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 23-236
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 72, 186

Conread position: 23-247
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 6

Conread position: 24-243
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 25-211
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 25-248
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 29-230
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 33

Conread position: 29-245
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 29-251
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 120

Conread position: 30-246
Cow position:
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 85

Conread position: 31-236
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 193

Conread position: 31-248
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 100, 50

Conread position: 32-236
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 110

Conread position: 36-200
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 36-255
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 37-235
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 78

Conread position: 39-230
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 26

Conread position: 41-248
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 113

Conread position: 44-217
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 44-248
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 50

Conread position: 44-255
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 154

Conread position: 46-236
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 19

Conread position: 54-239
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 55-239
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 55-247
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 164, 76

Conread position: 57-233
Cow position:
Alignm length: 180
Alignm identity: 149
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 61

Conread position: 67-247
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 26

Conread position: 99-266
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.