Cow genome map
| Conread name: | LyN1-MLN01C050017 |
| Conread position: | 1-146 |
| Cow position: | chr20:23235064-23234918 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-146 |
| Cow position: | chr20:24834122-24833975 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 1-170 |
| Cow position: | chr20:16585606-16585781 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 1-197 |
| Cow position: | chr20:31081069-31080874 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 1-245 |
| Cow position: | chr20:10033893-10034148 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-245 |
| Cow position: | chr20:32577891-32578138 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 1-255 |
| Cow position: | chr20:20359755-20360004 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 2-102 |
| Cow position: | chr20:7062410-7062308 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-148 |
| Cow position: | chr20:11355245-11355097 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 70, 114 |
| Conread position: | 2-168 |
| Cow position: | chr20:8261937-8261766 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 2-224 |
| Cow position: | chr20:2802065-2802276 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 2-245 |
| Cow position: | chr20:39415772-39415528 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 2-247 |
| Cow position: | chr20:14831587-14831833 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 2-248 |
| Cow position: | chr20:14679648-14679397 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 152 |
| Conread position: | 2-248 |
| Cow position: | chr20:26077108-26076864 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 2-248 |
| Cow position: | chr20:27977681-27977931 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 2-252 |
| Cow position: | chr20:4204319-4204069 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 2-266 |
| Cow position: | chr20:10759447-10759704 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 2-266 |
| Cow position: | chr20:24869006-24869267 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 3-113 |
| Cow position: | chr20:23604885-23604994 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 3-247 |
| Cow position: | chr20:4894869-4895113 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 3-250 |
| Cow position: | chr20:5826966-5826714 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 3-250 |
| Cow position: | chr20:23792634-23792381 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 5-177 |
| Cow position: | chr20:24234180-24234010 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 5-210 |
| Cow position: | chr20:25274265-25274462 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 5-211 |
| Cow position: | chr20:614691-614482 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 68, 203 |
| Conread position: | 5-220 |
| Cow position: | chr20:11542260-11542476 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 15 |
| Conread position: | 5-222 |
| Cow position: | chr20:23846649-23846867 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 5-235 |
| Cow position: | chr20:12041125-12041355 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 71, 50 |
| Conread position: | 5-236 |
| Cow position: | chr20:27001415-27001185 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 5-236 |
| Cow position: | chr20:33177215-33176973 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 5-239 |
| Cow position: | chr20:32861974-32862204 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 68, 55 |
| Conread position: | 5-243 |
| Cow position: | chr20:40511735-40511973 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 5-245 |
| Cow position: | chr20:30817559-30817319 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 76 |
| Conread position: | 5-246 |
| Cow position: | chr20:6848652-6848403 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 5-247 |
| Cow position: | chr20:6571350-6571112 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 12 |
| Conread position: | 5-248 |
| Cow position: | chr20:13967235-13967479 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-248 |
| Cow position: | chr20:18399787-18399540 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 5-248 |
| Cow position: | chr20:22313140-22313381 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 5-250 |
| Cow position: | chr20:26880884-26881136 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 244 |
| Conread position: | 5-251 |
| Cow position: | chr20:282904-283152 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 126, 23 |
| Conread position: | 5-251 |
| Cow position: | chr20:5576797-5576544 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 207 |
| Conread position: | 5-263 |
| Cow position: | chr20:20471806-20471556 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 134, 82 |
| Conread position: | 6-245 |
| Cow position: | chr20:38123914-38123669 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 6-248 |
| Cow position: | chr20:25686327-25686572 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 7-220 |
| Cow position: | chr20:32084057-32084277 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 198 |
| Conread position: | 7-220 |
| Cow position: | chr20:34108137-34107923 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 7-244 |
| Cow position: | chr20:3331268-3331511 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 7-248 |
| Cow position: | chr20:8429773-8429524 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 217 |
| Conread position: | 7-248 |
| Cow position: | chr20:14756045-14756288 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 213 |
| Conread position: | 7-266 |
| Cow position: | chr20:14572339-14572595 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 8-152 |
| Cow position: | chr20:37609251-37609106 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 8-209 |
| Cow position: | chr20:38027989-38028189 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 8-235 |
| Cow position: | chr20:40177267-40177044 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 8-247 |
| Cow position: | chr20:13493755-13493518 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 8-247 |
| Cow position: | chr20:23505848-23505609 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 8-247 |
| Cow position: | chr20:35897540-35897298 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 8-248 |
| Cow position: | chr20:21325134-21324905 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 208, 9 |
| Conread position: | 9-132 |
| Cow position: | chr20:15918003-15917879 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 9-225 |
| Cow position: | chr20:33144531-33144753 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 9-229 |
| Cow position: | chr20:15593317-15593094 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 9-235 |
| Cow position: | chr20:36331404-36331636 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 9-239 |
| Cow position: | chr20:40559554-40559326 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 9-247 |
| Cow position: | chr20:29845069-29844835 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 13 |
| Conread position: | 9-247 |
| Cow position: | chr20:34777202-34776966 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 9-248 |
| Cow position: | chr20:12581936-12582168 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 143, 68 |
| Conread position: | 9-248 |
| Cow position: | chr20:18320771-18321018 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 9-248 |
| Cow position: | chr20:27340081-27339846 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 9-248 |
| Cow position: | chr20:28982720-28982477 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 208 |
| Conread position: | 9-248 |
| Cow position: | chr20:31464355-31464602 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 9-248 |
| Cow position: | chr20:35958666-35958428 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 9-249 |
| Cow position: | chr20:35797630-35797384 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 9-255 |
| Cow position: | chr20:38768438-38768681 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-234 |
| Cow position: | chr20:8020917-8020688 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 211 |
| Conread position: | 10-239 |
| Cow position: | chr20:13956064-13955829 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 173 |
| Conread position: | 10-243 |
| Cow position: | chr20:10469085-10468855 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 10-243 |
| Cow position: | chr20:19363346-19363578 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 10-248 |
| Cow position: | chr20:6240501-6240750 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-248 |
| Cow position: | chr20:11550385-11550145 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 10-248 |
| Cow position: | chr20:13876685-13876929 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 10-248 |
| Cow position: | chr20:18413874-18413636 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 67 |
| Conread position: | 11-138 |
| Cow position: | chr20:39056023-39056151 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-164 |
| Cow position: | chr20:34178453-34178614 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 11-170 |
| Cow position: | chr20:19339854-19340010 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 11-209 |
| Cow position: | chr20:28888921-28888701 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 11-219 |
| Cow position: | chr20:14471526-14471741 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 65, 172 |
| Conread position: | 11-230 |
| Cow position: | chr20:8578265-8578043 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 11-236 |
| Cow position: | chr20:14806904-14806677 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 11-248 |
| Cow position: | chr20:5998654-5998887 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 211, 76 |
| Conread position: | 11-248 |
| Cow position: | chr20:17670200-17669961 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 11-251 |
| Cow position: | chr20:6096475-6096709 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 11-263 |
| Cow position: | chr20:38818024-38817776 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 11-266 |
| Cow position: | chr20:25823301-25823047 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 12-218 |
| Cow position: | chr20:13994831-13994618 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 12-230 |
| Cow position: | chr20:2913980-2913759 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 12-245 |
| Cow position: | chr20:19328417-19328182 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 12-248 |
| Cow position: | chr20:10200360-10200120 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 12-248 |
| Cow position: | chr20:17904176-17903935 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 12-248 |
| Cow position: | chr20:26996552-26996313 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 5, 208 |
| Conread position: | 12-248 |
| Cow position: | chr20:39398502-39398268 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 13-211 |
| Cow position: | chr20:11864113-11864320 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 13-212 |
| Cow position: | chr20:7550255-7550056 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 13-217 |
| Cow position: | chr20:14865159-14865368 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 13-230 |
| Cow position: | chr20:33178504-33178729 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 13-239 |
| Cow position: | chr20:15576871-15577103 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 160 |
| Conread position: | 13-242 |
| Cow position: | chr20:220637-220403 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 13-243 |
| Cow position: | chr20:40256987-40256754 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 13-245 |
| Cow position: | chr20:22445621-22445852 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 126, 70 |
| Conread position: | 13-248 |
| Cow position: | chr20:10235868-10235631 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 126, 15 |
| Conread position: | 14-228 |
| Cow position: | chr20:15073820-15074033 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 14-239 |
| Cow position: | chr20:19266170-19265945 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 14-245 |
| Cow position: | chr20:12995995-12996227 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 125, 92 |
| Conread position: | 14-266 |
| Cow position: | chr20:7442111-7442363 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 14-266 |
| Cow position: | chr20:29632985-29633228 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 15-220 |
| Cow position: | chr20:6603054-6602848 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 15-239 |
| Cow position: | chr20:40127321-40127548 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 15-266 |
| Cow position: | chr20:42458833-42459088 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 16-200 |
| Cow position: | chr20:3569055-3569233 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 6 |
| Conread position: | 16-229 |
| Cow position: | chr20:42138387-42138169 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 205 |
| Conread position: | 16-245 |
| Cow position: | chr20:6238623-6238865 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 16-248 |
| Cow position: | chr20:5104428-5104655 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 16-248 |
| Cow position: | chr20:15582026-15582256 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 126, 6 |
| Conread position: | 16-255 |
| Cow position: | chr20:15548886-15549123 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 16-265 |
| Cow position: | chr20:22007512-22007266 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 6 |
| Conread position: | 17-142 |
| Cow position: | chr20:12676458-12676331 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 120 |
| Conread position: | 17-236 |
| Cow position: | chr20:9379423-9379200 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 17-245 |
| Cow position: | chr20:17845970-17845742 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 17-247 |
| Cow position: | chr20:19238416-19238650 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 17-248 |
| Cow position: | chr20:21345440-21345185 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 17-251 |
| Cow position: | chr20:41500526-41500767 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 59, 202 |
| Conread position: | 17-255 |
| Cow position: | chr20:3781414-3781655 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 64 |
| Conread position: | 17-266 |
| Cow position: | chr20:13465522-13465279 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 17-266 |
| Cow position: | chr20:14735688-14735438 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 18-182 |
| Cow position: | chr20:5636494-5636325 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 18-239 |
| Cow position: | chr20:11482123-11482351 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 18-242 |
| Cow position: | chr20:12334387-12334167 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 18-245 |
| Cow position: | chr20:17251727-17251493 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 18-251 |
| Cow position: | chr20:13048401-13048642 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 19-243 |
| Cow position: | chr20:17733764-17733989 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 19-248 |
| Cow position: | chr20:9433596-9433381 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 20-248 |
| Cow position: | chr20:31746620-31746842 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 20-265 |
| Cow position: | chr20:15148005-15148251 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 21-236 |
| Cow position: | chr20:7600773-7600986 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 22-239 |
| Cow position: | chr20:28296299-28296078 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 22-250 |
| Cow position: | chr20:19146882-19146647 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 22-251 |
| Cow position: | chr20:19751315-19751085 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 114 |
| Conread position: | 23-248 |
| Cow position: | chr20:4359654-4359875 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 24-214 |
| Cow position: | chr20:36207810-36207615 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 24-247 |
| Cow position: | chr20:14759655-14759884 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-248 |
| Cow position: | chr20:34202655-34202426 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 29-243 |
| Cow position: | chr20:35907051-35907261 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 29-248 |
| Cow position: | chr20:33169872-33170095 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 29-266 |
| Cow position: | chr20:12420619-12420860 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 31-263 |
| Cow position: | chr20:4205966-4205729 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 225 |
| Conread position: | 33-247 |
| Cow position: | chr20:18551359-18551143 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 38 |
| Conread position: | 36-197 |
| Cow position: | chr20:12362872-12363033 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 42-235 |
| Cow position: | chr20:29308517-29308714 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 46-248 |
| Cow position: | chr20:41977398-41977201 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 50-243 |
| Cow position: | chr20:18491165-18490971 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 51-176 |
| Cow position: | chr20:38858434-38858557 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 59-250 |
| Cow position: | chr20:3892012-3891821 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 73-266 |
| Cow position: | chr20:16157400-16157595 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 78-249 |
| Cow position: | chr20:30856032-30856205 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 140 |
Show alignments to all cow chromosomes.