Cow genome map

Conread name: LyN1-MLN01C050017

Conread position: 1-235
Cow position: chr26:2389049-2389285 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 138, 76

Conread position: 1-242
Cow position: chr26:12669200-12668959 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 61

Conread position: 1-244
Cow position: chr26:22161860-22162111 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 223

Conread position: 1-247
Cow position: chr26:782931-783179 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 35

Conread position: 1-248
Cow position: chr26:2769838-2770085 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 164

Conread position: 2-148
Cow position: chr26:27585776-27585627 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 134

Conread position: 2-194
Cow position: chr26:3019415-3019621 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 2-210
Cow position: chr26:2609800-2610011 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 13

Conread position: 2-243
Cow position: chr26:20129671-20129918 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 69

Conread position: 2-247
Cow position: chr26:2246957-2246702 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-247
Cow position: chr26:14080706-14080471 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 2-247
Cow position: chr26:23272786-23272537 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 0

Conread position: 2-248
Cow position: chr26:33745922-33745666 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-251
Cow position: chr26:9666407-9666657 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 150

Conread position: 2-263
Cow position: chr26:17289207-17288944 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 3-174
Cow position: chr26:10292589-10292424 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 108

Conread position: 3-243
Cow position: chr26:31794773-31794531 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 3-248
Cow position: chr26:818466-818711 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 128, 17

Conread position: 4-129
Cow position: chr26:33194644-33194521 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 87

Conread position: 5-195
Cow position: chr26:19110909-19110708 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 67, 0

Conread position: 5-213
Cow position: chr26:33567050-33567255 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 91, 14

Conread position: 5-229
Cow position: chr26:19774304-19774531 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 17

Conread position: 5-230
Cow position: chr26:17204148-17204367 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 37

Conread position: 5-236
Cow position: chr26:9632373-9632604 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 58

Conread position: 5-247
Cow position: chr26:7103033-7103283 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-251
Cow position: chr26:34738153-34738398 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 17

Conread position: 6-214
Cow position: chr26:16604281-16604067 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 67, 51

Conread position: 6-237
Cow position: chr26:1587590-1587368 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 70

Conread position: 6-245
Cow position: chr26:25737471-25737227 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 11

Conread position: 6-248
Cow position: chr26:8811126-8810885 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 7-172
Cow position: chr26:30605364-30605534 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 7-213
Cow position: chr26:32865892-32866100 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 103

Conread position: 7-247
Cow position: chr26:18692421-18692190 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 120

Conread position: 7-248
Cow position: chr26:12155120-12155358 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 122

Conread position: 7-266
Cow position: chr26:2408726-2408973 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 35

Conread position: 7-266
Cow position: chr26:6828166-6827901 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 8-165
Cow position: chr26:19178613-19178456 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 65

Conread position: 8-248
Cow position: chr26:10767913-10768146 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 126

Conread position: 9-235
Cow position: chr26:16906342-16906122 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 61

Conread position: 9-236
Cow position: chr26:6475435-6475662 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 207

Conread position: 9-245
Cow position: chr26:3706788-3706556 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 20

Conread position: 9-246
Cow position: chr26:16549980-16549735 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 9-246
Cow position: chr26:21418459-21418698 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 11

Conread position: 9-248
Cow position: chr26:3071971-3072210 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 123

Conread position: 9-248
Cow position: chr26:34847736-34847496 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 208

Conread position: 10-243
Cow position: chr26:20260574-20260348 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 125

Conread position: 10-246
Cow position: chr26:9604556-9604307 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 108

Conread position: 10-247
Cow position: chr26:33227804-33227562 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 237

Conread position: 11-168
Cow position: chr26:22354408-22354246 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 11-220
Cow position: chr26:31605399-31605188 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 149

Conread position: 11-244
Cow position: chr26:8700056-8700293 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 11

Conread position: 11-245
Cow position: chr26:13706012-13706241 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 150

Conread position: 11-248
Cow position: chr26:33045072-33044834 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 18

Conread position: 12-233
Cow position: chr26:21243093-21242872 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 107

Conread position: 12-235
Cow position: chr26:31779472-31779240 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 10

Conread position: 12-248
Cow position: chr26:6323654-6323418 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 19

Conread position: 14-246
Cow position: chr26:29353517-29353759 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 14-254
Cow position: chr26:5246489-5246743 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 91

Conread position: 14-266
Cow position: chr26:14924472-14924234 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 120, 138

Conread position: 15-245
Cow position: chr26:3921766-3921991 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 15

Conread position: 16-248
Cow position: chr26:6498248-6498009 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 26

Conread position: 16-248
Cow position: chr26:9104295-9104528 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 6

Conread position: 16-248
Cow position: chr26:13021158-13021396 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 16-249
Cow position: chr26:12807530-12807766 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 25

Conread position: 17-236
Cow position: chr26:32897885-32898106 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 17-239
Cow position: chr26:14958027-14958252 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 192

Conread position: 17-241
Cow position: chr26:21921656-21921875 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 43

Conread position: 17-248
Cow position: chr26:27491515-27491749 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 200

Conread position: 17-251
Cow position: chr26:10814186-10813964 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 18-266
Cow position: chr26:16921924-16921674 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 83, 61

Conread position: 18-266
Cow position: chr26:19769099-19769350 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 19-236
Cow position: chr26:8277582-8277807 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 54, 82

Conread position: 19-244
Cow position: chr26:8034850-8034614 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 102

Conread position: 19-248
Cow position: chr26:32659468-32659698 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 159

Conread position: 19-255
Cow position: chr26:18231351-18231115 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 117

Conread position: 20-239
Cow position: chr26:9064324-9064109 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 67, 51

Conread position: 21-248
Cow position: chr26:4664450-4664676 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 65

Conread position: 21-248
Cow position: chr26:9867135-9867361 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 194, 0

Conread position: 21-266
Cow position: chr26:17675751-17675995 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 25

Conread position: 22-241
Cow position: chr26:21351670-21351448 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 73

Conread position: 22-245
Cow position: chr26:11263623-11263393 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 22-249
Cow position: chr26:30806524-30806760 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 76

Conread position: 22-251
Cow position: chr26:32026385-32026612 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 157

Conread position: 23-248
Cow position: chr26:27594613-27594396 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 140

Conread position: 24-248
Cow position: chr26:12661536-12661762 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 91

Conread position: 29-243
Cow position: chr26:3181971-3182191 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 29-248
Cow position: chr26:31890068-31889843 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 53

Conread position: 31-245
Cow position: chr26:7961604-7961393 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 32-245
Cow position: chr26:8745861-8746079 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 38

Conread position: 33-147
Cow position: chr26:12519989-12519872 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 33-241
Cow position: chr26:30034436-30034645 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 48

Conread position: 36-248
Cow position: chr26:6714326-6714530 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 42-209
Cow position: chr26:21339787-21339617 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 42-247
Cow position: chr26:19447463-19447670 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 167

Conread position: 44-239
Cow position: chr26:7053990-7053791 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 43

Conread position: 44-266
Cow position: chr26:4747896-4748122 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 33, 176

Conread position: 46-257
Cow position: chr26:27163407-27163191 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 96, 51

Conread position: 49-236
Cow position: chr26:33212410-33212602 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 68-248
Cow position: chr26:12125382-12125549 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 81-266
Cow position: chr26:12216769-12216588 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 88-251
Cow position: chr26:19333392-19333547 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 46

Show alignments to all cow chromosomes.