Cow genome map
| Conread name: | LyN1-MLN01C050017 |
| Conread position: | 1-166 |
| Cow position: | chr27:12424946-12424788 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 1-225 |
| Cow position: | chr27:30844105-30843881 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 1-226 |
| Cow position: | chr27:22330700-22330472 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 78, 151 |
| Conread position: | 1-234 |
| Cow position: | chr27:19647969-19647738 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 208 |
| Conread position: | 1-245 |
| Cow position: | chr27:6541601-6541842 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-247 |
| Cow position: | chr27:20120422-20120673 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 1-249 |
| Cow position: | chr27:464926-465176 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 154 |
| Conread position: | 1-249 |
| Cow position: | chr27:23455184-23454925 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 219 |
| Conread position: | 1-255 |
| Cow position: | chr27:16580591-16580848 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 1-266 |
| Cow position: | chr27:19577645-19577912 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 97 |
| Conread position: | 2-201 |
| Cow position: | chr27:6159954-6160155 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 117 |
| Conread position: | 2-225 |
| Cow position: | chr27:6037094-6037319 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 2-230 |
| Cow position: | chr27:4664452-4664672 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 2-244 |
| Cow position: | chr27:7971541-7971786 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 2-247 |
| Cow position: | chr27:8430467-8430220 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 2-248 |
| Cow position: | chr27:490868-491107 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 2-248 |
| Cow position: | chr27:6454182-6454433 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 2-248 |
| Cow position: | chr27:27049937-27049692 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 2-248 |
| Cow position: | chr27:29038967-29038722 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 137, 85 |
| Conread position: | 2-250 |
| Cow position: | chr27:13005817-13006054 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 2-255 |
| Cow position: | chr27:27053268-27053522 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 2-266 |
| Cow position: | chr27:25998676-25998940 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 3-243 |
| Cow position: | chr27:8230786-8231009 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 211, 56 |
| Conread position: | 4-247 |
| Cow position: | chr27:27632629-27632390 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 4-248 |
| Cow position: | chr27:21138796-21139045 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 5-195 |
| Cow position: | chr27:23600242-23600433 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 5-218 |
| Cow position: | chr27:14937452-14937238 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 137 |
| Conread position: | 5-220 |
| Cow position: | chr27:18739356-18739580 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 5-221 |
| Cow position: | chr27:23659361-23659147 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 5-222 |
| Cow position: | chr27:21181818-21182031 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 5-239 |
| Cow position: | chr27:815341-815576 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 145 |
| Conread position: | 5-239 |
| Cow position: | chr27:12246635-12246871 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 31 |
| Conread position: | 5-240 |
| Cow position: | chr27:30582712-30582950 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 5-243 |
| Cow position: | chr27:19637618-19637849 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 5-247 |
| Cow position: | chr27:27641030-27640773 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 226 |
| Conread position: | 5-248 |
| Cow position: | chr27:4812904-4812657 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 5-248 |
| Cow position: | chr27:22418791-22418546 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 134, 27 |
| Conread position: | 5-248 |
| Cow position: | chr27:26492726-26492480 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 65 |
| Conread position: | 5-261 |
| Cow position: | chr27:6620120-6620379 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 5-263 |
| Cow position: | chr27:2592521-2592776 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 6-200 |
| Cow position: | chr27:24357234-24357438 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 6-213 |
| Cow position: | chr27:22547432-22547219 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 6-218 |
| Cow position: | chr27:30988771-30988989 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 6-250 |
| Cow position: | chr27:22220532-22220776 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 133, 70 |
| Conread position: | 7-210 |
| Cow position: | chr27:27550768-27550565 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 7-230 |
| Cow position: | chr27:20354563-20354782 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-234 |
| Cow position: | chr27:26807587-26807357 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-248 |
| Cow position: | chr27:8942707-8942463 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 7-248 |
| Cow position: | chr27:26441085-26440838 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 218 |
| Conread position: | 8-138 |
| Cow position: | chr27:14874615-14874747 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 8-170 |
| Cow position: | chr27:18948620-18948448 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-179 |
| Cow position: | chr27:19601358-19601528 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 8-227 |
| Cow position: | chr27:29283431-29283211 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 210 |
| Conread position: | 8-247 |
| Cow position: | chr27:30765011-30765251 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 8-248 |
| Cow position: | chr27:16493554-16493775 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 8-265 |
| Cow position: | chr27:12596744-12596992 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 9-236 |
| Cow position: | chr27:15668790-15668559 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 31 |
| Conread position: | 9-241 |
| Cow position: | chr27:22171278-22171511 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 9-241 |
| Cow position: | chr27:30359384-30359608 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 9-243 |
| Cow position: | chr27:17472787-17473028 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 9-245 |
| Cow position: | chr27:22723726-22723489 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 127 |
| Conread position: | 9-246 |
| Cow position: | chr27:4672997-4673239 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 9-248 |
| Cow position: | chr27:11416427-11416663 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 9-248 |
| Cow position: | chr27:21351041-21350795 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 9-248 |
| Cow position: | chr27:22440119-22440362 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 9-248 |
| Cow position: | chr27:28921917-28921676 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 9-251 |
| Cow position: | chr27:30550976-30551219 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 10-140 |
| Cow position: | chr27:9692071-9691942 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 10-177 |
| Cow position: | chr27:12244145-12243986 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 10-226 |
| Cow position: | chr27:25471121-25471338 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 10-241 |
| Cow position: | chr27:30676889-30677112 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 65, 171 |
| Conread position: | 10-245 |
| Cow position: | chr27:25923774-25924002 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 10-247 |
| Cow position: | chr27:10307322-10307076 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 10-248 |
| Cow position: | chr27:8962277-8962049 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 10-249 |
| Cow position: | chr27:23554351-23554098 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 246 |
| Conread position: | 10-251 |
| Cow position: | chr27:26653285-26653528 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 11-218 |
| Cow position: | chr27:20591961-20592174 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 11-239 |
| Cow position: | chr27:17926640-17926426 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-243 |
| Cow position: | chr27:26224294-26224054 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 130 |
| Conread position: | 11-248 |
| Cow position: | chr27:10979845-10980084 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 11-248 |
| Cow position: | chr27:11435340-11435113 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 11-249 |
| Cow position: | chr27:732551-732791 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 11-249 |
| Cow position: | chr27:26299817-26300060 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 11-249 |
| Cow position: | chr27:27040584-27040830 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 11-249 |
| Cow position: | chr27:30417660-30417895 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 202 |
| Conread position: | 11-249 |
| Cow position: | chr27:30868758-30868519 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 12-196 |
| Cow position: | chr27:22268483-22268673 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 12-230 |
| Cow position: | chr27:2683162-2682941 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 12-244 |
| Cow position: | chr27:4386079-4385849 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 79 |
| Conread position: | 12-245 |
| Cow position: | chr27:26428148-26427911 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 12-247 |
| Cow position: | chr27:25292144-25292367 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 12-251 |
| Cow position: | chr27:30560895-30561135 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 12-255 |
| Cow position: | chr27:28164425-28164184 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 137 |
| Conread position: | 13-219 |
| Cow position: | chr27:27554702-27554495 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 13-241 |
| Cow position: | chr27:15925324-15925548 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 13-248 |
| Cow position: | chr27:14670404-14670162 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 13-255 |
| Cow position: | chr27:706933-707175 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 13-256 |
| Cow position: | chr27:25790786-25791032 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 13-266 |
| Cow position: | chr27:25676209-25676471 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 14-246 |
| Cow position: | chr27:11601017-11600797 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 14-248 |
| Cow position: | chr27:26935924-26935698 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 14-250 |
| Cow position: | chr27:13875715-13875950 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 15-245 |
| Cow position: | chr27:11273562-11273787 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 15-249 |
| Cow position: | chr27:22603161-22603384 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 16-245 |
| Cow position: | chr27:25379979-25380208 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-248 |
| Cow position: | chr27:11081181-11081416 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 17-183 |
| Cow position: | chr27:23890926-23891093 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 17-223 |
| Cow position: | chr27:27234009-27234220 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 17-229 |
| Cow position: | chr27:30703088-30702880 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 17-248 |
| Cow position: | chr27:1353575-1353803 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 5 |
| Conread position: | 17-249 |
| Cow position: | chr27:19388001-19388242 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 17-251 |
| Cow position: | chr27:12429391-12429631 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 17-255 |
| Cow position: | chr27:27389031-27388803 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 17-266 |
| Cow position: | chr27:6523025-6523284 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 18-179 |
| Cow position: | chr27:10086695-10086530 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 120, 82 |
| Conread position: | 18-230 |
| Cow position: | chr27:27055563-27055780 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 12 |
| Conread position: | 18-245 |
| Cow position: | chr27:30354355-30354128 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 122, 199 |
| Conread position: | 19-223 |
| Cow position: | chr27:26595409-26595627 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 19-248 |
| Cow position: | chr27:8048753-8048519 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 175 |
| Conread position: | 19-248 |
| Cow position: | chr27:18593258-18593487 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 22-242 |
| Cow position: | chr27:29399807-29400031 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 22-247 |
| Cow position: | chr27:14902661-14902430 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 22-248 |
| Cow position: | chr27:15271902-15272126 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 23-195 |
| Cow position: | chr27:15643164-15643343 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 25-219 |
| Cow position: | chr27:6038591-6038782 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 52, 128 |
| Conread position: | 25-247 |
| Cow position: | chr27:29019757-29019527 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 26-250 |
| Cow position: | chr27:22771747-22771979 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 28-247 |
| Cow position: | chr27:11762736-11762520 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 29-245 |
| Cow position: | chr27:7935159-7934946 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 100 |
| Conread position: | 29-248 |
| Cow position: | chr27:8629874-8629654 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 108, 161 |
| Conread position: | 29-248 |
| Cow position: | chr27:26398259-26398039 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 33-243 |
| Cow position: | chr27:1903062-1903279 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 33-248 |
| Cow position: | chr27:16619991-16620211 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 188 |
| Conread position: | 35-266 |
| Cow position: | chr27:23137179-23137405 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 39-236 |
| Cow position: | chr27:20510203-20510395 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 42-244 |
| Cow position: | chr27:28018345-28018553 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 42-266 |
| Cow position: | chr27:19543895-19543671 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 44-242 |
| Cow position: | chr27:22518647-22518842 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 44-259 |
| Cow position: | chr27:24321200-24321420 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 176 |
| Conread position: | 48-247 |
| Cow position: | chr27:22179776-22179578 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 49-239 |
| Cow position: | chr27:24341917-24342115 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 56-243 |
| Cow position: | chr27:19717948-19718135 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 56-250 |
| Cow position: | chr27:31372266-31372073 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 68-243 |
| Cow position: | chr27:25982672-25982492 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 99-266 |
| Cow position: | chr27:21578533-21578364 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.