Cow genome map
| Conread name: | LyN1-MLN01C080049 |
| Conread position: | 12-630 |
| Cow position: | chr13:39984281-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 12-761 |
| Cow position: | chr13:39984113-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 296 |
| Conread position: | 12-825 |
| Cow position: | chr13:39983945-39984758 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 587, 583 |
| Conread position: | 24-680 |
| Cow position: | chr13:56333605-56334270 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 390 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 331, 284 |
| Conread position: | 26-331 |
| Cow position: | chr13:39930875-39931178 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 27-550 |
| Cow position: | chr13:39984380-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 351, 344 |
| Conread position: | 27-818 |
| Cow position: | chr13:56292721-56291935 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 480 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 155, 215 |
| Conread position: | 28-579 |
| Cow position: | chr13:39930625-39931174 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 30-351 |
| Cow position: | chr13:56292135-56291813 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 281, 309 |
| Conread position: | 30-678 |
| Cow position: | chr13:56333695-56334350 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 317, 321 |
| Conread position: | 30-816 |
| Cow position: | chr13:39984047-39984833 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 266 |
| Conread position: | 32-515 |
| Cow position: | chr13:22125414-22125897 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 32-519 |
| Cow position: | chr13:24163140-24163628 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 32-761 |
| Cow position: | chr13:24162888-24163617 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 319 |
| Conread position: | 32-813 |
| Cow position: | chr13:22124742-22125523 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 32-834 |
| Cow position: | chr13:22124826-22125628 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 350 |
| Conread position: | 32-834 |
| Cow position: | chr13:24162468-24163270 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 338 |
| Conread position: | 32-834 |
| Cow position: | chr13:24162552-24163354 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 32-835 |
| Cow position: | chr13:22124994-22125797 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 472 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 32-835 |
| Cow position: | chr13:24162720-24163523 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 33-760 |
| Cow position: | chr13:22124911-22125638 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 43-834 |
| Cow position: | chr13:22125088-22125880 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 252 |
| Conread position: | 43-834 |
| Cow position: | chr13:24162814-24163606 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 266 |
| Conread position: | 48-761 |
| Cow position: | chr13:22125178-22125891 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 303 |
| Conread position: | 51-679 |
| Cow position: | chr13:39984236-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-710 |
| Cow position: | chr13:22125265-22125924 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 383 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 127, 146 |
| Conread position: | 73-663 |
| Cow position: | chr13:39930586-39931174 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 425, 433 |
| Conread position: | 73-834 |
| Cow position: | chr13:24162677-24163438 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 76-816 |
| Cow position: | chr13:39983841-39984581 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 78-816 |
| Cow position: | chr13:39983927-39984665 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 578, 585 |
| Conread position: | 103-474 |
| Cow position: | chr13:56292146-56291774 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 285, 279 |
| Conread position: | 112-813 |
| Cow position: | chr13:56333525-56334235 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 417 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 113-595 |
| Cow position: | chr13:56292293-56291821 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 135-816 |
| Cow position: | chr13:39983816-39984497 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 144-822 |
| Cow position: | chr13:22124686-22125364 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 404 |
| Conread position: | 144-822 |
| Cow position: | chr13:24162412-24163090 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 404 |
| Conread position: | 155-749 |
| Cow position: | chr13:39930584-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 351 |
| Conread position: | 158-682 |
| Cow position: | chr13:56292332-56291818 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 176-714 |
| Cow position: | chr13:56333505-56334043 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 215-816 |
| Cow position: | chr13:39983812-39984413 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 364 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 233-834 |
| Cow position: | chr13:22124691-22125292 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 233-834 |
| Cow position: | chr13:24162417-24163018 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 240-831 |
| Cow position: | chr13:39930585-39931174 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 266 |
| Conread position: | 312-834 |
| Cow position: | chr13:39930573-39931095 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 332-834 |
| Cow position: | chr13:39983845-39984347 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 324, 329 |
| Conread position: | 358-834 |
| Cow position: | chr13:22124731-22125208 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.