Cow genome map

Conread name: LyN1-MLN01C080049

Conread position: 13-834
Cow position: chr19:20677494-20678318 (view UCSC Genome Browser custom track)
Alignm length: 831
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 263

Conread position: 14-474
Cow position: chr19:23614659-23615117 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 291
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 167, 161

Conread position: 14-631
Cow position: chr19:14940459-14941076 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-539
Cow position: chr19:43570168-43569652 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 314
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 426, 0

Conread position: 20-634
Cow position: chr19:43570251-43569641 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 0

Conread position: 24-479
Cow position: chr19:23597258-23597713 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 272

Conread position: 24-594
Cow position: chr19:14960330-14959764 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 24-762
Cow position: chr19:23649699-23650437 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-834
Cow position: chr19:23614249-23615059 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-675
Cow position: chr19:20678097-20678744 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 234

Conread position: 26-408
Cow position: chr19:20635402-20635020 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 74

Conread position: 26-834
Cow position: chr19:23596843-23597648 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 193

Conread position: 27-312
Cow position: chr19:14959100-14958817 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 272, 0

Conread position: 27-679
Cow position: chr19:14960411-14959763 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 27-708
Cow position: chr19:23614420-23615101 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 73

Conread position: 27-834
Cow position: chr19:23613412-23614219 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-834
Cow position: chr19:23613496-23614303 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 27-834
Cow position: chr19:23614084-23614891 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-468
Cow position: chr19:23650041-23650479 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-492
Cow position: chr19:20635482-20635020 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 292
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 53

Conread position: 30-517
Cow position: chr19:14948483-14947997 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 70

Conread position: 30-635
Cow position: chr19:23649873-23650478 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 418

Conread position: 30-642
Cow position: chr19:23614507-23615117 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 602, 0

Conread position: 30-645
Cow position: chr19:23597096-23597711 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 301

Conread position: 30-675
Cow position: chr19:20678020-20678663 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 14

Conread position: 30-715
Cow position: chr19:14940391-14941076 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-716
Cow position: chr19:23649789-23650475 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-798
Cow position: chr19:14940307-14941075 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 419

Conread position: 30-799
Cow position: chr19:23614339-23615108 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 154

Conread position: 30-831
Cow position: chr19:23613583-23614384 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 649

Conread position: 30-831
Cow position: chr19:23613751-23614552 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 70

Conread position: 30-832
Cow position: chr19:14940223-14941025 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 288

Conread position: 30-834
Cow position: chr19:23613835-23614639 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-834
Cow position: chr19:23649453-23650257 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 266

Conread position: 30-836
Cow position: chr19:23613919-23614725 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 278

Conread position: 32-554
Cow position: chr19:23649959-23650481 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 32-678
Cow position: chr19:14959500-14958869 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 144

Conread position: 32-826
Cow position: chr19:23649371-23650165 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 562, 577

Conread position: 32-834
Cow position: chr19:23614173-23614975 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 647, 655

Conread position: 34-812
Cow position: chr19:14959582-14958819 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 225

Conread position: 34-816
Cow position: chr19:20677602-20678384 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 164

Conread position: 34-831
Cow position: chr19:14940143-14940940 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 284

Conread position: 34-834
Cow position: chr19:23649289-23650089 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 37-834
Cow position: chr19:20677857-20678654 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 138

Conread position: 40-813
Cow position: chr19:23596941-23597711 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 94

Conread position: 45-678
Cow position: chr19:20635635-20635002 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 306

Conread position: 46-813
Cow position: chr19:20677782-20678549 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 228

Conread position: 46-832
Cow position: chr19:14960142-14959372 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 466, 327

Conread position: 46-834
Cow position: chr19:14959808-14959049 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 96

Conread position: 46-836
Cow position: chr19:14940071-14940861 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 54

Conread position: 51-716
Cow position: chr19:23597032-23597698 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 258

Conread position: 51-759
Cow position: chr19:20677955-20678663 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 53-766
Cow position: chr19:20677453-20678166 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 559, 552

Conread position: 53-810
Cow position: chr19:14959646-14958905 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 11

Conread position: 53-834
Cow position: chr19:14939994-14940775 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 251

Conread position: 53-834
Cow position: chr19:23613354-23614135 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 243

Conread position: 65-813
Cow position: chr19:43570447-43569712 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 71-761
Cow position: chr19:14960451-14959765 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 74-716
Cow position: chr19:43570278-43569643 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 74-832
Cow position: chr19:23649581-23650339 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 201

Conread position: 74-836
Cow position: chr19:23649665-23650427 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 533

Conread position: 128-816
Cow position: chr19:20677360-20678048 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 72

Conread position: 131-809
Cow position: chr19:14960475-14959801 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 132-679
Cow position: chr19:14915962-14916499 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 338
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 57, 41

Conread position: 134-816
Cow position: chr19:23613351-23614033 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 197

Conread position: 135-836
Cow position: chr19:23596868-23597566 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 49

Conread position: 170-816
Cow position: chr19:43570425-43569791 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 197-682
Cow position: chr19:14948484-14948000 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 209-812
Cow position: chr19:20635639-20635036 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 215-834
Cow position: chr19:14939988-14940607 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 221-836
Cow position: chr19:23613354-23613969 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 87

Conread position: 242-831
Cow position: chr19:14960448-14959861 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 266-834
Cow position: chr19:23613315-23613883 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 278-832
Cow position: chr19:23649281-23649835 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 294-834
Cow position: chr19:43570469-43569941 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 335
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 20

Conread position: 301-834
Cow position: chr19:14939990-14940523 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 388

Conread position: 304-761
Cow position: chr19:14948460-14948005 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 13

Conread position: 371-834
Cow position: chr19:20635562-20635098 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 316

Conread position: 385-834
Cow position: chr19:14960473-14960026 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 385-834
Cow position: chr19:20635631-20635182 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 73

Conread position: 386-836
Cow position: chr19:14939989-14940441 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 438

Conread position: 387-829
Cow position: chr19:14948462-14948021 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 387-834
Cow position: chr19:14960387-14959942 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 220

Conread position: 394-834
Cow position: chr19:20677374-20677814 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 272
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 296, 286

Conread position: 405-834
Cow position: chr19:14939842-14940271 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 258
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 51

Conread position: 444-834
Cow position: chr19:23649279-23649669 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 325

Conread position: 448-834
Cow position: chr19:14948485-14948100 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 250
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 232, 85

Conread position: 466-834
Cow position: chr19:14939987-14940355 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 544-834
Cow position: chr19:20635640-20635350 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 220, 225

Show alignments to all cow chromosomes.