Cow genome map
Conread name: | LyN1-MLN01C080049 |
Conread position: | 13-834 |
Cow position: | chr19:20677494-20678318 (view UCSC Genome Browser custom track) |
Alignm length: | 831 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 263 |
Conread position: | 14-474 |
Cow position: | chr19:23614659-23615117 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 291 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 167, 161 |
Conread position: | 14-631 |
Cow position: | chr19:14940459-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-539 |
Cow position: | chr19:43570168-43569652 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 314 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 426, 0 |
Conread position: | 20-634 |
Cow position: | chr19:43570251-43569641 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 519, 0 |
Conread position: | 24-479 |
Cow position: | chr19:23597258-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 272 |
Conread position: | 24-594 |
Cow position: | chr19:14960330-14959764 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 0 |
Conread position: | 24-762 |
Cow position: | chr19:23649699-23650437 (view UCSC Genome Browser custom track) |
Alignm length: | 739 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-834 |
Cow position: | chr19:23614249-23615059 (view UCSC Genome Browser custom track) |
Alignm length: | 811 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-675 |
Cow position: | chr19:20678097-20678744 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 234 |
Conread position: | 26-408 |
Cow position: | chr19:20635402-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 235 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 69, 74 |
Conread position: | 26-834 |
Cow position: | chr19:23596843-23597648 (view UCSC Genome Browser custom track) |
Alignm length: | 810 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 193 |
Conread position: | 27-312 |
Cow position: | chr19:14959100-14958817 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 181 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 272, 0 |
Conread position: | 27-679 |
Cow position: | chr19:14960411-14959763 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 0 |
Conread position: | 27-708 |
Cow position: | chr19:23614420-23615101 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 73 |
Conread position: | 27-834 |
Cow position: | chr19:23613412-23614219 (view UCSC Genome Browser custom track) |
Alignm length: | 808 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-834 |
Cow position: | chr19:23613496-23614303 (view UCSC Genome Browser custom track) |
Alignm length: | 809 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 53 |
Conread position: | 27-834 |
Cow position: | chr19:23614084-23614891 (view UCSC Genome Browser custom track) |
Alignm length: | 808 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-468 |
Cow position: | chr19:23650041-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-492 |
Cow position: | chr19:20635482-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 292 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 60, 53 |
Conread position: | 30-517 |
Cow position: | chr19:14948483-14947997 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 70 |
Conread position: | 30-635 |
Cow position: | chr19:23649873-23650478 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 418 |
Conread position: | 30-642 |
Cow position: | chr19:23614507-23615117 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 602, 0 |
Conread position: | 30-645 |
Cow position: | chr19:23597096-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 301 |
Conread position: | 30-675 |
Cow position: | chr19:20678020-20678663 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 14 |
Conread position: | 30-715 |
Cow position: | chr19:14940391-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-716 |
Cow position: | chr19:23649789-23650475 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-798 |
Cow position: | chr19:14940307-14941075 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 419 |
Conread position: | 30-799 |
Cow position: | chr19:23614339-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 774 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 154 |
Conread position: | 30-831 |
Cow position: | chr19:23613583-23614384 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 649 |
Conread position: | 30-831 |
Cow position: | chr19:23613751-23614552 (view UCSC Genome Browser custom track) |
Alignm length: | 803 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 70 |
Conread position: | 30-832 |
Cow position: | chr19:14940223-14941025 (view UCSC Genome Browser custom track) |
Alignm length: | 805 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 288 |
Conread position: | 30-834 |
Cow position: | chr19:23613835-23614639 (view UCSC Genome Browser custom track) |
Alignm length: | 805 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-834 |
Cow position: | chr19:23649453-23650257 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 266 |
Conread position: | 30-836 |
Cow position: | chr19:23613919-23614725 (view UCSC Genome Browser custom track) |
Alignm length: | 808 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 278 |
Conread position: | 32-554 |
Cow position: | chr19:23649959-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 32-678 |
Cow position: | chr19:14959500-14958869 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 144 |
Conread position: | 32-826 |
Cow position: | chr19:23649371-23650165 (view UCSC Genome Browser custom track) |
Alignm length: | 796 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 562, 577 |
Conread position: | 32-834 |
Cow position: | chr19:23614173-23614975 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 647, 655 |
Conread position: | 34-812 |
Cow position: | chr19:14959582-14958819 (view UCSC Genome Browser custom track) |
Alignm length: | 783 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 225 |
Conread position: | 34-816 |
Cow position: | chr19:20677602-20678384 (view UCSC Genome Browser custom track) |
Alignm length: | 786 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 164 |
Conread position: | 34-831 |
Cow position: | chr19:14940143-14940940 (view UCSC Genome Browser custom track) |
Alignm length: | 799 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 284 |
Conread position: | 34-834 |
Cow position: | chr19:23649289-23650089 (view UCSC Genome Browser custom track) |
Alignm length: | 801 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-834 |
Cow position: | chr19:20677857-20678654 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 138 |
Conread position: | 40-813 |
Cow position: | chr19:23596941-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 94 |
Conread position: | 45-678 |
Cow position: | chr19:20635635-20635002 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 306 |
Conread position: | 46-813 |
Cow position: | chr19:20677782-20678549 (view UCSC Genome Browser custom track) |
Alignm length: | 775 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 228 |
Conread position: | 46-832 |
Cow position: | chr19:14960142-14959372 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 466, 327 |
Conread position: | 46-834 |
Cow position: | chr19:14959808-14959049 (view UCSC Genome Browser custom track) |
Alignm length: | 791 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 487, 96 |
Conread position: | 46-836 |
Cow position: | chr19:14940071-14940861 (view UCSC Genome Browser custom track) |
Alignm length: | 792 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 54 |
Conread position: | 51-716 |
Cow position: | chr19:23597032-23597698 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 258 |
Conread position: | 51-759 |
Cow position: | chr19:20677955-20678663 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 40 |
Conread position: | 53-766 |
Cow position: | chr19:20677453-20678166 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 559, 552 |
Conread position: | 53-810 |
Cow position: | chr19:14959646-14958905 (view UCSC Genome Browser custom track) |
Alignm length: | 762 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 11 |
Conread position: | 53-834 |
Cow position: | chr19:14939994-14940775 (view UCSC Genome Browser custom track) |
Alignm length: | 784 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 251 |
Conread position: | 53-834 |
Cow position: | chr19:23613354-23614135 (view UCSC Genome Browser custom track) |
Alignm length: | 785 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 243 |
Conread position: | 65-813 |
Cow position: | chr19:43570447-43569712 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 50 |
Conread position: | 71-761 |
Cow position: | chr19:14960451-14959765 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 40 |
Conread position: | 74-716 |
Cow position: | chr19:43570278-43569643 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 74-832 |
Cow position: | chr19:23649581-23650339 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 201 |
Conread position: | 74-836 |
Cow position: | chr19:23649665-23650427 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 522, 533 |
Conread position: | 128-816 |
Cow position: | chr19:20677360-20678048 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 72 |
Conread position: | 131-809 |
Cow position: | chr19:14960475-14959801 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 0 |
Conread position: | 132-679 |
Cow position: | chr19:14915962-14916499 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 338 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 57, 41 |
Conread position: | 134-816 |
Cow position: | chr19:23613351-23614033 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 197 |
Conread position: | 135-836 |
Cow position: | chr19:23596868-23597566 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 49 |
Conread position: | 170-816 |
Cow position: | chr19:43570425-43569791 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 197-682 |
Cow position: | chr19:14948484-14948000 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 209-812 |
Cow position: | chr19:20635639-20635036 (view UCSC Genome Browser custom track) |
Alignm length: | 608 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 75 |
Conread position: | 215-834 |
Cow position: | chr19:14939988-14940607 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 221-836 |
Cow position: | chr19:23613354-23613969 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 87 |
Conread position: | 242-831 |
Cow position: | chr19:14960448-14959861 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 0 |
Conread position: | 266-834 |
Cow position: | chr19:23613315-23613883 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 19 |
Conread position: | 278-832 |
Cow position: | chr19:23649281-23649835 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 73 |
Conread position: | 294-834 |
Cow position: | chr19:43570469-43569941 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 335 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 301-834 |
Cow position: | chr19:14939990-14940523 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 378, 388 |
Conread position: | 304-761 |
Cow position: | chr19:14948460-14948005 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 376, 13 |
Conread position: | 371-834 |
Cow position: | chr19:20635562-20635098 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 316 |
Conread position: | 385-834 |
Cow position: | chr19:14960473-14960026 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 0 |
Conread position: | 385-834 |
Cow position: | chr19:20635631-20635182 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 73 |
Conread position: | 386-836 |
Cow position: | chr19:14939989-14940441 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 438 |
Conread position: | 387-829 |
Cow position: | chr19:14948462-14948021 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 387-834 |
Cow position: | chr19:14960387-14959942 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 220 |
Conread position: | 394-834 |
Cow position: | chr19:20677374-20677814 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 272 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 296, 286 |
Conread position: | 405-834 |
Cow position: | chr19:14939842-14940271 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 258 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 81, 51 |
Conread position: | 444-834 |
Cow position: | chr19:23649279-23649669 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 325 |
Conread position: | 448-834 |
Cow position: | chr19:14948485-14948100 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 250 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 232, 85 |
Conread position: | 466-834 |
Cow position: | chr19:14939987-14940355 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 239 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 544-834 |
Cow position: | chr19:20635640-20635350 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 189 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 220, 225 |
Show alignments to all cow chromosomes.