Cow genome map
| Conread name: | LyN1-MLN01C080049 |
| Conread position: | 12-810 |
| Cow position: | chr2:78754880-78755673 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 22-834 |
| Cow position: | chr2:78754403-78755197 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 39 |
| Conread position: | 23-380 |
| Cow position: | chr2:82800088-82800445 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-811 |
| Cow position: | chr2:5875124-5874336 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 247 |
| Conread position: | 24-831 |
| Cow position: | chr2:78754571-78755361 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 24-831 |
| Cow position: | chr2:82799585-82800392 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 143 |
| Conread position: | 30-570 |
| Cow position: | chr2:78755817-78756355 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 30-792 |
| Cow position: | chr2:82799675-82800437 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-816 |
| Cow position: | chr2:82799507-82800293 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 231 |
| Conread position: | 31-834 |
| Cow position: | chr2:78755401-78756202 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 32-390 |
| Cow position: | chr2:48689391-48689033 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 235, 247 |
| Conread position: | 32-498 |
| Cow position: | chr2:5874611-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 227, 236 |
| Conread position: | 33-677 |
| Cow position: | chr2:86465586-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 387 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 34-761 |
| Cow position: | chr2:86465419-86466146 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 34-816 |
| Cow position: | chr2:78755153-78755931 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 34-834 |
| Cow position: | chr2:78754817-78755615 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 40-551 |
| Cow position: | chr2:82799937-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-834 |
| Cow position: | chr2:86465341-86466135 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 45-761 |
| Cow position: | chr2:86465514-86466228 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 46-716 |
| Cow position: | chr2:82799775-82800445 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 460 |
| Conread position: | 47-834 |
| Cow position: | chr2:5874932-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 466 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 51-595 |
| Cow position: | chr2:5874676-5874132 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 346, 330 |
| Conread position: | 53-517 |
| Cow position: | chr2:48689537-48689074 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 329, 134 |
| Conread position: | 73-681 |
| Cow position: | chr2:5874738-5874130 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 74-813 |
| Cow position: | chr2:5875157-5874418 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 441 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 74-816 |
| Cow position: | chr2:78754287-78755011 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 74-831 |
| Cow position: | chr2:82799467-82800224 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 277 |
| Conread position: | 76-595 |
| Cow position: | chr2:48689595-48689080 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 79-809 |
| Cow position: | chr2:86465128-86465858 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 125 |
| Conread position: | 113-834 |
| Cow position: | chr2:86465078-86465799 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 116-794 |
| Cow position: | chr2:78754161-78754832 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 117-834 |
| Cow position: | chr2:5874946-5874229 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 148-816 |
| Cow position: | chr2:82799457-82800125 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 241 |
| Conread position: | 149-834 |
| Cow position: | chr2:5875166-5874481 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 291 |
| Conread position: | 183-834 |
| Cow position: | chr2:82799408-82800059 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 218-834 |
| Cow position: | chr2:5875181-5874565 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 370 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 178, 163 |
| Conread position: | 284-813 |
| Cow position: | chr2:78754161-78754688 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 281, 0 |
| Conread position: | 301-750 |
| Cow position: | chr2:48689542-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 133 |
| Conread position: | 389-822 |
| Cow position: | chr2:78754101-78754529 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 186, 66 |
| Conread position: | 401-836 |
| Cow position: | chr2:48689525-48689091 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 454-836 |
| Cow position: | chr2:86465083-86465465 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 178, 183 |
| Conread position: | 457-822 |
| Cow position: | chr2:48689553-48689189 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 149, 0 |
Show alignments to all cow chromosomes.