Cow genome map
| Conread name: | LyN1-MLN01C080049 |
| Conread position: | 4-290 |
| Cow position: | chr23:24639843-24640128 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 4-294 |
| Cow position: | chr23:24654072-24654362 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-465 |
| Cow position: | chr23:25660274-25660735 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 12-307 |
| Cow position: | chr23:24546947-24546652 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 102 |
| Conread position: | 12-379 |
| Cow position: | chr23:25724080-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 12-723 |
| Cow position: | chr23:24560843-24560132 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 287 |
| Conread position: | 14-223 |
| Cow position: | chr23:24560337-24560128 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-479 |
| Cow position: | chr23:24639601-24640066 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 346 |
| Conread position: | 14-654 |
| Cow position: | chr23:24547281-24546641 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 294 |
| Conread position: | 17-559 |
| Cow position: | chr23:24535992-24535451 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 5 |
| Conread position: | 17-578 |
| Cow position: | chr23:24639520-24640081 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-716 |
| Cow position: | chr23:25626337-25627030 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 500, 5 |
| Conread position: | 20-441 |
| Cow position: | chr23:24639690-24640112 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 20-513 |
| Cow position: | chr23:24522679-24522188 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 22-516 |
| Cow position: | chr23:25698599-25698105 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 252, 242 |
| Conread position: | 22-654 |
| Cow position: | chr23:24639441-24640073 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 156 |
| Conread position: | 22-836 |
| Cow position: | chr23:25626087-25626898 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 286 |
| Conread position: | 24-295 |
| Cow position: | chr23:24626451-24626722 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-813 |
| Cow position: | chr23:24639275-24640064 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 124 |
| Conread position: | 27-306 |
| Cow position: | chr23:25626761-25627040 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-435 |
| Cow position: | chr23:25698510-25698102 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 187, 202 |
| Conread position: | 27-762 |
| Cow position: | chr23:24522755-24522008 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 147 |
| Conread position: | 27-834 |
| Cow position: | chr23:25626008-25626812 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 428 |
| Conread position: | 30-228 |
| Cow position: | chr23:24654182-24654380 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-408 |
| Cow position: | chr23:24626373-24626749 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 0 |
| Conread position: | 30-428 |
| Cow position: | chr23:24560489-24560092 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 288 |
| Conread position: | 30-520 |
| Cow position: | chr23:25626596-25627087 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 228 |
| Conread position: | 32-371 |
| Cow position: | chr23:25698421-25698082 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-554 |
| Cow position: | chr23:25660218-25660740 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 168 |
| Conread position: | 32-558 |
| Cow position: | chr23:24560655-24560129 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-642 |
| Cow position: | chr23:25626449-25627040 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 6 |
| Conread position: | 51-833 |
| Cow position: | chr23:25626200-25626977 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 55-338 |
| Cow position: | chr23:24521972-24521689 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 63-715 |
| Cow position: | chr23:24547316-24546664 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-492 |
| Cow position: | chr23:24626324-24626749 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 0 |
| Conread position: | 65-633 |
| Cow position: | chr23:25660167-25660735 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-681 |
| Cow position: | chr23:24560706-24560091 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 593, 563 |
| Conread position: | 65-682 |
| Cow position: | chr23:24536029-24535411 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 231 |
| Conread position: | 65-716 |
| Cow position: | chr23:24639400-24640051 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 113 |
| Conread position: | 74-542 |
| Cow position: | chr23:24654058-24654520 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 74-625 |
| Cow position: | chr23:25698631-25698080 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 435, 446 |
| Conread position: | 74-810 |
| Cow position: | chr23:24560865-24560129 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-834 |
| Cow position: | chr23:24639241-24640001 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 75-706 |
| Cow position: | chr23:24522791-24522163 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 78-463 |
| Cow position: | chr23:25724099-25723713 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 14, 277 |
| Conread position: | 90-682 |
| Cow position: | chr23:25698699-25698107 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 101-576 |
| Cow position: | chr23:24626276-24626749 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 112-834 |
| Cow position: | chr23:24560911-24560189 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 243 |
| Conread position: | 124-761 |
| Cow position: | chr23:24536054-24535416 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 172 |
| Conread position: | 127-696 |
| Cow position: | chr23:25660145-25660714 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 191 |
| Conread position: | 133-761 |
| Cow position: | chr23:24522815-24522192 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 147-465 |
| Cow position: | chr23:24654047-24654365 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-525 |
| Cow position: | chr23:25724111-25723735 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-834 |
| Cow position: | chr23:24639232-24639917 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 154-798 |
| Cow position: | chr23:24547309-24546665 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 442 |
| Conread position: | 183-654 |
| Cow position: | chr23:24626274-24626743 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 188-818 |
| Cow position: | chr23:25626001-25626628 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 575, 0 |
| Conread position: | 215-834 |
| Cow position: | chr23:25625946-25626563 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 497, 30 |
| Conread position: | 221-834 |
| Cow position: | chr23:24522812-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 237-829 |
| Cow position: | chr23:24536109-24535517 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 240-800 |
| Cow position: | chr23:25660174-25660734 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 242-549 |
| Cow position: | chr23:24654058-24654365 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 242-653 |
| Cow position: | chr23:25724102-25723692 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 276, 280 |
| Conread position: | 242-811 |
| Cow position: | chr23:24536020-24535451 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 242-834 |
| Cow position: | chr23:24547305-24546713 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 107 |
| Conread position: | 259-834 |
| Cow position: | chr23:25698698-25698123 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 282-834 |
| Cow position: | chr23:24639197-24639749 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 302-723 |
| Cow position: | chr23:24626309-24626730 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-834 |
| Cow position: | chr23:25660163-25660684 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-718 |
| Cow position: | chr23:25724111-25723710 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 317-816 |
| Cow position: | chr23:24547314-24546815 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 385-832 |
| Cow position: | chr23:25660151-25660598 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 211 |
| Conread position: | 385-834 |
| Cow position: | chr23:24547330-24546881 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 211 |
| Conread position: | 386-821 |
| Cow position: | chr23:24626309-24626744 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 395-552 |
| Cow position: | chr23:25723616-25723459 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-798 |
| Cow position: | chr23:25724107-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-834 |
| Cow position: | chr23:24626302-24626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 305 |
| Conread position: | 484-834 |
| Cow position: | chr23:25724112-25723762 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 485-800 |
| Cow position: | chr23:24654049-24654364 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 282, 277 |
| Conread position: | 485-831 |
| Cow position: | chr23:24536029-24535683 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 485-834 |
| Cow position: | chr23:25660167-25660516 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 283 |
| Conread position: | 548-834 |
| Cow position: | chr23:25660146-25660432 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 219, 215 |
| Conread position: | 557-834 |
| Cow position: | chr23:24536041-24535764 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 138 |
| Conread position: | 564-834 |
| Cow position: | chr23:25724116-25723846 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 602-836 |
| Cow position: | chr23:24547281-24547047 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 165, 161 |
| Conread position: | 603-834 |
| Cow position: | chr23:24626274-24626505 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 23 |
Show alignments to all cow chromosomes.