Cow genome map
| Conread name: | LyN1-MLN01C080049 |
| Conread position: | 12-436 |
| Cow position: | chr7:1015069-1015495 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 13-759 |
| Cow position: | chr7:8243347-8244092 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 453 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 14-509 |
| Cow position: | chr7:8325620-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 338 |
| Conread position: | 18-816 |
| Cow position: | chr7:1014408-1015201 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 156 |
| Conread position: | 20-805 |
| Cow position: | chr7:11601216-11600432 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 21-813 |
| Cow position: | chr7:8242851-8243645 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 466 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 24-642 |
| Cow position: | chr7:3180259-3180876 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 284 |
| Conread position: | 24-718 |
| Cow position: | chr7:42878966-42878272 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 88 |
| Conread position: | 24-800 |
| Cow position: | chr7:42879050-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-516 |
| Cow position: | chr7:1014914-1015405 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 25-676 |
| Cow position: | chr7:3180176-3180825 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 333 |
| Conread position: | 25-693 |
| Cow position: | chr7:18390139-18390805 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 25-816 |
| Cow position: | chr7:3180008-3180799 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 173 |
| Conread position: | 25-831 |
| Cow position: | chr7:3179756-3180562 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 741, 745 |
| Conread position: | 25-834 |
| Cow position: | chr7:1014332-1015135 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 235 |
| Conread position: | 26-678 |
| Cow position: | chr7:8277740-8278392 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 235 |
| Conread position: | 26-834 |
| Cow position: | chr7:8325129-8325937 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 483 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 27-645 |
| Cow position: | chr7:1014832-1015450 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 30-480 |
| Cow position: | chr7:1015003-1015453 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-716 |
| Cow position: | chr7:18390058-18390744 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 152 |
| Conread position: | 30-759 |
| Cow position: | chr7:1439534-1440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 55 |
| Conread position: | 30-759 |
| Cow position: | chr7:8324965-8325694 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 254 |
| Conread position: | 30-782 |
| Cow position: | chr7:8325385-8326137 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 312 |
| Conread position: | 30-810 |
| Cow position: | chr7:3180097-3180876 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 30-810 |
| Cow position: | chr7:18389974-18390754 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 274 |
| Conread position: | 30-816 |
| Cow position: | chr7:8277576-8278362 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 277 |
| Conread position: | 30-816 |
| Cow position: | chr7:42879128-42878342 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 484, 490 |
| Conread position: | 30-816 |
| Cow position: | chr7:42879212-42878426 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 30-834 |
| Cow position: | chr7:3179929-3180733 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 30-834 |
| Cow position: | chr7:8277324-8278128 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 482 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 276, 267 |
| Conread position: | 31-761 |
| Cow position: | chr7:1014668-1015398 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 31-816 |
| Cow position: | chr7:1439451-1440236 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 32-716 |
| Cow position: | chr7:1014753-1015437 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-359 |
| Cow position: | chr7:18390481-18390807 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 254, 276 |
| Conread position: | 38-418 |
| Cow position: | chr7:28846663-28847043 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 229, 222 |
| Conread position: | 45-834 |
| Cow position: | chr7:3179860-3180649 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-585 |
| Cow position: | chr7:28846508-28847042 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 321 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 147, 134 |
| Conread position: | 51-761 |
| Cow position: | chr7:11434969-11434280 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 438 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 51-787 |
| Cow position: | chr7:8243220-8243955 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 430 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 137, 129 |
| Conread position: | 51-813 |
| Cow position: | chr7:42879275-42878513 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 52-834 |
| Cow position: | chr7:8324735-8325517 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 53-834 |
| Cow position: | chr7:8324820-8325601 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 55-761 |
| Cow position: | chr7:8242804-8243509 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 416 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 55-834 |
| Cow position: | chr7:8325242-8326021 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 464 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 64-834 |
| Cow position: | chr7:1014287-1015051 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 65-717 |
| Cow position: | chr7:28846438-28847090 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 391 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 218, 211 |
| Conread position: | 65-834 |
| Cow position: | chr7:3179712-3180481 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 75-570 |
| Cow position: | chr7:1438190-1438685 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 310, 306 |
| Conread position: | 91-816 |
| Cow position: | chr7:1014645-1015369 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 602, 10 |
| Conread position: | 102-522 |
| Cow position: | chr7:1438301-1438721 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 141 |
| Conread position: | 113-834 |
| Cow position: | chr7:3179676-3180397 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-834 |
| Cow position: | chr7:1439451-1440170 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 137 |
| Conread position: | 121-836 |
| Cow position: | chr7:1014260-1014969 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 0 |
| Conread position: | 125-816 |
| Cow position: | chr7:42879369-42878678 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 126-681 |
| Cow position: | chr7:11434824-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 355 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 126-834 |
| Cow position: | chr7:42879284-42878576 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 170 |
| Conread position: | 130-816 |
| Cow position: | chr7:8277256-8277942 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 415 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 135-816 |
| Cow position: | chr7:18389995-18390676 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 316 |
| Conread position: | 149-753 |
| Cow position: | chr7:28846438-28847042 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 358 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 214, 210 |
| Conread position: | 163-660 |
| Cow position: | chr7:1438194-1438691 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 257, 265 |
| Conread position: | 205-834 |
| Cow position: | chr7:8277583-8278212 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 383 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 154, 141 |
| Conread position: | 215-834 |
| Cow position: | chr7:11601190-11600571 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 241-761 |
| Cow position: | chr7:28846446-28846966 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 253-813 |
| Cow position: | chr7:1014224-1014778 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 254-834 |
| Cow position: | chr7:3179648-3180229 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 280-810 |
| Cow position: | chr7:1439448-1439978 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 282-818 |
| Cow position: | chr7:42879296-42878760 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 100 |
| Conread position: | 302-832 |
| Cow position: | chr7:12293348-12293878 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 305 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-834 |
| Cow position: | chr7:18389997-18390526 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 325 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 309-836 |
| Cow position: | chr7:12293271-12293798 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 368-834 |
| Cow position: | chr7:42879294-42878828 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 369-834 |
| Cow position: | chr7:42879377-42878912 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 386-834 |
| Cow position: | chr7:18390162-18390610 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 147 |
| Conread position: | 401-836 |
| Cow position: | chr7:28846438-28846873 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 224, 204 |
| Conread position: | 407-836 |
| Cow position: | chr7:12293285-12293714 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 191, 202 |
| Conread position: | 453-836 |
| Cow position: | chr7:11601204-11600821 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 485-835 |
| Cow position: | chr7:28846438-28846788 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 29 |
Show alignments to all cow chromosomes.