Cow genome map
| Conread name: | LyN1-MLN01C080049 |
| Conread position: | 19-834 |
| Cow position: | chrX:25325449-25324635 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 22-831 |
| Cow position: | chrX:29045687-29044899 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 78 |
| Conread position: | 24-653 |
| Cow position: | chrX:29045286-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 87 |
| Conread position: | 24-677 |
| Cow position: | chrX:25324941-25324288 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 24-810 |
| Cow position: | chrX:25309780-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 332 |
| Conread position: | 24-822 |
| Cow position: | chrX:25325529-25324731 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 90 |
| Conread position: | 25-816 |
| Cow position: | chrX:25325024-25324233 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 25-818 |
| Cow position: | chrX:25325360-25324567 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 87 |
| Conread position: | 25-824 |
| Cow position: | chrX:25325192-25324393 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 773, 768 |
| Conread position: | 25-834 |
| Cow position: | chrX:29045768-29044980 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 742, 389 |
| Conread position: | 26-517 |
| Cow position: | chrX:13826720-13826229 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 69, 80 |
| Conread position: | 27-402 |
| Cow position: | chrX:25310203-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 29-507 |
| Cow position: | chrX:12627585-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 30-657 |
| Cow position: | chrX:25309954-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 326 |
| Conread position: | 30-834 |
| Cow position: | chrX:25325271-25324467 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 30-834 |
| Cow position: | chrX:25325691-25324887 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 278 |
| Conread position: | 30-834 |
| Cow position: | chrX:25325775-25324971 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 70 |
| Conread position: | 40-327 |
| Cow position: | chrX:14181232-14180945 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 271, 257 |
| Conread position: | 47-675 |
| Cow position: | chrX:12627436-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 48-808 |
| Cow position: | chrX:14181643-14180884 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 5 |
| Conread position: | 51-592 |
| Cow position: | chrX:13826779-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 51-816 |
| Cow position: | chrX:25309725-25310488 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 51-836 |
| Cow position: | chrX:25325586-25324801 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 267 |
| Conread position: | 52-695 |
| Cow position: | chrX:13826862-13826216 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 73-760 |
| Cow position: | chrX:13826925-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 117 |
| Conread position: | 76-724 |
| Cow position: | chrX:29045318-29044670 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 79-834 |
| Cow position: | chrX:25309667-25310422 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 95 |
| Conread position: | 113-834 |
| Cow position: | chrX:25325776-25325055 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 71 |
| Conread position: | 117-835 |
| Cow position: | chrX:14181659-14180941 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 243 |
| Conread position: | 129-524 |
| Cow position: | chrX:29045832-29045440 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 133-834 |
| Cow position: | chrX:13826949-13826248 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 132 |
| Conread position: | 161-810 |
| Cow position: | chrX:29045317-29044668 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 244-831 |
| Cow position: | chrX:29045318-29044731 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 304-836 |
| Cow position: | chrX:14181640-14181108 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 326 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 219, 206 |
| Conread position: | 330-816 |
| Cow position: | chrX:25309666-25310152 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 356-834 |
| Cow position: | chrX:25325785-25325307 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 363-832 |
| Cow position: | chrX:13826971-13826502 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 154 |
| Conread position: | 385-784 |
| Cow position: | chrX:29045828-29045432 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 385-834 |
| Cow position: | chrX:29045261-29044812 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-815 |
| Cow position: | chrX:29045830-29045482 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 43 |
Show alignments to all cow chromosomes.