Cow genome map
| Conread name: | LyN1-MLN01C120028 |
| Conread position: | 129-464 |
| Cow position: | chr11:21512608-21512281 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 158-464 |
| Cow position: | chr11:76532403-76532708 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 164-351 |
| Cow position: | chr11:62236010-62235828 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 165-439 |
| Cow position: | chr11:76534364-76534097 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 207, 47 |
| Conread position: | 172-340 |
| Cow position: | chr11:70890514-70890351 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 178-345 |
| Cow position: | chr11:7435509-7435672 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 178-364 |
| Cow position: | chr11:48660367-48660550 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 177, 34 |
| Conread position: | 188-346 |
| Cow position: | chr11:5608303-5608458 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 189-420 |
| Cow position: | chr11:12409761-12409529 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 228-464 |
| Cow position: | chr11:16880965-16880731 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 226, 30 |
| Conread position: | 230-645 |
| Cow position: | chr11:71359546-71359132 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 300-445 |
| Cow position: | chr11:2718377-2718236 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 300-445 |
| Cow position: | chr11:4249327-4249468 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 331-644 |
| Cow position: | chr11:48259068-48258757 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 334-610 |
| Cow position: | chr11:62582361-62582097 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 334-648 |
| Cow position: | chr11:32816076-32815755 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 16 |
| Conread position: | 339-500 |
| Cow position: | chr11:65957382-65957215 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 340-566 |
| Cow position: | chr11:48257426-48257194 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 340-621 |
| Cow position: | chr11:65879012-65879299 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 14, 249 |
| Conread position: | 341-566 |
| Cow position: | chr11:40540221-40540455 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 165 |
| Conread position: | 341-598 |
| Cow position: | chr11:52074459-52074719 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 192 |
| Conread position: | 343-576 |
| Cow position: | chr11:38210472-38210706 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 109, 80 |
| Conread position: | 351-646 |
| Cow position: | chr11:372029-372339 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 360-552 |
| Cow position: | chr11:8555691-8555884 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 383-576 |
| Cow position: | chr11:84807873-84807672 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 413-630 |
| Cow position: | chr11:65995126-65994904 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 453-646 |
| Cow position: | chr11:62580241-62580440 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 0 |
Show alignments to all cow chromosomes.