Cow genome map
| Conread name: | LyN1-MLN01C120028 |
| Conread position: | 132-560 |
| Cow position: | chr18:22058406-22058817 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 22 |
| Conread position: | 151-351 |
| Cow position: | chr18:4490776-4490963 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 153-393 |
| Cow position: | chr18:1169255-1169490 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 157-339 |
| Cow position: | chr18:11498381-11498203 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 158-349 |
| Cow position: | chr18:11180501-11180306 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 158-350 |
| Cow position: | chr18:18425414-18425604 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 158-371 |
| Cow position: | chr18:39132943-39133152 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 161-343 |
| Cow position: | chr18:16063124-16062946 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 161-392 |
| Cow position: | chr18:10403660-10403888 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 161-566 |
| Cow position: | chr18:30509769-30510159 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 161-567 |
| Cow position: | chr18:11417694-11417310 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 47 |
| Conread position: | 165-464 |
| Cow position: | chr18:29222736-29222443 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 165-464 |
| Cow position: | chr18:55059923-55060208 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 286, 47 |
| Conread position: | 172-337 |
| Cow position: | chr18:13716831-13716996 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 172-339 |
| Cow position: | chr18:365859-366024 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 36 |
| Conread position: | 174-464 |
| Cow position: | chr18:9922099-9921808 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 179-643 |
| Cow position: | chr18:25132432-25131955 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 183-442 |
| Cow position: | chr18:43654775-43654527 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 260-647 |
| Cow position: | chr18:39038312-39037903 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 315-566 |
| Cow position: | chr18:3327157-3326909 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 125, 107 |
| Conread position: | 329-586 |
| Cow position: | chr18:11498059-11497812 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 119, 65 |
| Conread position: | 340-562 |
| Cow position: | chr18:30346588-30346813 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 111, 152 |
| Conread position: | 340-646 |
| Cow position: | chr18:35039879-35039574 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 154 |
| Conread position: | 341-520 |
| Cow position: | chr18:4468409-4468589 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 352-566 |
| Cow position: | chr18:45616185-45616403 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 359-562 |
| Cow position: | chr18:39133249-39133451 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 382-685 |
| Cow position: | chr18:39044181-39043873 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 235 |
Show alignments to all cow chromosomes.