Cow genome map
| Conread name: | LyN1-MLN01C120028 |
| Conread position: | 151-464 |
| Cow position: | chr2:53319151-53319465 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 152-350 |
| Cow position: | chr2:85012132-85011941 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 157-346 |
| Cow position: | chr2:41124457-41124643 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 157-369 |
| Cow position: | chr2:16364565-16364354 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 157-492 |
| Cow position: | chr2:46275984-46275651 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 158-349 |
| Cow position: | chr2:46279761-46279574 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 158-361 |
| Cow position: | chr2:36660974-36661173 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 158-361 |
| Cow position: | chr2:64793328-64793123 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 54 |
| Conread position: | 158-441 |
| Cow position: | chr2:46296604-46296881 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 14 |
| Conread position: | 158-460 |
| Cow position: | chr2:47839441-47839142 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 158-464 |
| Cow position: | chr2:7445157-7444855 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 55 |
| Conread position: | 158-464 |
| Cow position: | chr2:18011652-18011361 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 162-377 |
| Cow position: | chr2:22360165-22359951 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 165-464 |
| Cow position: | chr2:4691944-4691652 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 48 |
| Conread position: | 165-464 |
| Cow position: | chr2:6731253-6731547 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 172, 13 |
| Conread position: | 172-647 |
| Cow position: | chr2:41329224-41328744 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 32 |
| Conread position: | 173-348 |
| Cow position: | chr2:69641247-69641418 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 174-640 |
| Cow position: | chr2:40049482-40049950 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 39 |
| Conread position: | 178-338 |
| Cow position: | chr2:39513312-39513154 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 178-464 |
| Cow position: | chr2:50541923-50542199 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 179-348 |
| Cow position: | chr2:82188063-82187898 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 167, 29 |
| Conread position: | 190-464 |
| Cow position: | chr2:37731208-37731477 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 194-464 |
| Cow position: | chr2:6301379-6301113 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 214-357 |
| Cow position: | chr2:41579945-41580085 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 215-393 |
| Cow position: | chr2:33112401-33112227 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 221-423 |
| Cow position: | chr2:21039204-21039006 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 260-463 |
| Cow position: | chr2:4966528-4966328 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 185, 9 |
| Conread position: | 281-464 |
| Cow position: | chr2:40737622-40737804 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 166, 104 |
| Conread position: | 318-654 |
| Cow position: | chr2:42655754-42655408 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 323-646 |
| Cow position: | chr2:55872317-55871987 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 9 |
| Conread position: | 327-646 |
| Cow position: | chr2:46220965-46220639 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 328-562 |
| Cow position: | chr2:45669747-45669531 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 340-610 |
| Cow position: | chr2:42231575-42231851 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 341-480 |
| Cow position: | chr2:74629171-74629314 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 341-581 |
| Cow position: | chr2:39665495-39665257 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 6, 70 |
| Conread position: | 341-644 |
| Cow position: | chr2:42317990-42318303 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 184 |
| Conread position: | 341-644 |
| Cow position: | chr2:67247874-67248186 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 342-561 |
| Cow position: | chr2:68605605-68605826 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 109, 183 |
| Conread position: | 342-646 |
| Cow position: | chr2:6724451-6724146 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 109, 135 |
| Conread position: | 351-559 |
| Cow position: | chr2:46603558-46603346 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 38, 144 |
| Conread position: | 355-566 |
| Cow position: | chr2:72618616-72618402 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 356-546 |
| Cow position: | chr2:82152874-82153068 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 357-646 |
| Cow position: | chr2:41128501-41128799 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 358-566 |
| Cow position: | chr2:35860431-35860232 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 421-572 |
| Cow position: | chr2:19245850-19246006 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 507-653 |
| Cow position: | chr2:74629647-74629792 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
Show alignments to all cow chromosomes.