Cow genome map


           Conread name:
           LyN1-MLN01C120028
        

               Conread position:
               157-351
               

               Cow position:
               chr21:3396287-3396096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               127, 51
               

               Conread position:
               158-393
               

               Cow position:
               chr21:20276651-20276430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               158-454
               

               Cow position:
               chr21:463904-463613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               164-348
               

               Cow position:
               chr21:39677571-39677391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               172-464
               

               Cow position:
               chr21:235761-235475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               165, 35
               

               Conread position:
               282-649
               

               Cow position:
               chr21:19781800-19781449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 16
               

               Conread position:
               334-610
               

               Cow position:
               chr21:7691581-7691303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               334-646
               

               Cow position:
               chr21:13812384-13812074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               340-646
               

               Cow position:
               chr21:20022618-20022902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               349-566
               

               Cow position:
               chr21:39327584-39327364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               381-618
               

               Cow position:
               chr21:40107302-40107554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.