Cow genome map
| Conread name: | LyN1-MLN01C120028 |
| Conread position: | 119-464 |
| Cow position: | chr3:17658007-17658347 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 157-403 |
| Cow position: | chr3:29084044-29084283 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 158-325 |
| Cow position: | chr3:24920780-24920617 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 158-348 |
| Cow position: | chr3:39204207-39204386 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 165, 46 |
| Conread position: | 158-354 |
| Cow position: | chr3:83964660-83964849 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 158-464 |
| Cow position: | chr3:9287517-9287225 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 288, 28 |
| Conread position: | 158-547 |
| Cow position: | chr3:60026203-60026573 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 50 |
| Conread position: | 161-464 |
| Cow position: | chr3:9005533-9005238 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 165-454 |
| Cow position: | chr3:35958661-35958380 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 173, 27 |
| Conread position: | 166-345 |
| Cow position: | chr3:2810497-2810671 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 166-553 |
| Cow position: | chr3:29145126-29144742 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 42 |
| Conread position: | 168-348 |
| Cow position: | chr3:79197492-79197673 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 189-447 |
| Cow position: | chr3:58244535-58244787 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 215-484 |
| Cow position: | chr3:60008962-60009227 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 230-345 |
| Cow position: | chr3:53599217-53599333 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 231-566 |
| Cow position: | chr3:31816041-31815720 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 38 |
| Conread position: | 295-566 |
| Cow position: | chr3:83489225-83488953 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 12 |
| Conread position: | 316-646 |
| Cow position: | chr3:81267152-81267490 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 324-562 |
| Cow position: | chr3:71209518-71209275 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 334-647 |
| Cow position: | chr3:59560109-59559789 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 334-663 |
| Cow position: | chr3:23086573-23086906 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 342-565 |
| Cow position: | chr3:12130125-12129897 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 342-647 |
| Cow position: | chr3:66133499-66133177 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 240 |
| Conread position: | 344-562 |
| Cow position: | chr3:39963735-39963945 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 345-581 |
| Cow position: | chr3:60018916-60018667 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 351-489 |
| Cow position: | chr3:39155301-39155443 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 351-575 |
| Cow position: | chr3:83963210-83962983 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 46 |
| Conread position: | 408-565 |
| Cow position: | chr3:83964848-83965006 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 483-646 |
| Cow position: | chr3:58244802-58244972 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 496-646 |
| Cow position: | chr3:39155482-39155638 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.