Cow genome map
| Conread name: | LyN1-MLN01C120028 |
| Conread position: | 148-447 |
| Cow position: | chr5:75183378-75183671 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 148-464 |
| Cow position: | chr5:43791581-43791891 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 149-464 |
| Cow position: | chr5:57359288-57358977 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 150-333 |
| Cow position: | chr5:45222200-45222022 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 155-463 |
| Cow position: | chr5:37944691-37944394 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 158-392 |
| Cow position: | chr5:43891844-43891616 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 158-454 |
| Cow position: | chr5:43793412-43793135 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 158-464 |
| Cow position: | chr5:49377179-49376875 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 164-603 |
| Cow position: | chr5:47859515-47859089 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 44 |
| Conread position: | 172-345 |
| Cow position: | chr5:30643807-30643638 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 172-348 |
| Cow position: | chr5:61482758-61482586 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 178-464 |
| Cow position: | chr5:41519610-41519338 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 265, 33 |
| Conread position: | 179-646 |
| Cow position: | chr5:56621787-56621326 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 188-460 |
| Cow position: | chr5:48219423-48219685 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 192-464 |
| Cow position: | chr5:29864311-29864580 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 214-566 |
| Cow position: | chr5:48194013-48193672 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 215-351 |
| Cow position: | chr5:17358874-17358739 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 220-345 |
| Cow position: | chr5:48135032-48135156 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 228-462 |
| Cow position: | chr5:48190836-48191071 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 223, 53 |
| Conread position: | 324-490 |
| Cow position: | chr5:57083302-57083133 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 341-566 |
| Cow position: | chr5:17682551-17682783 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 341-649 |
| Cow position: | chr5:44552113-44551816 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 108, 9 |
| Conread position: | 342-488 |
| Cow position: | chr5:43440734-43440585 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 351-566 |
| Cow position: | chr5:58760959-58760740 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 353-484 |
| Cow position: | chr5:38410961-38410826 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 355-566 |
| Cow position: | chr5:50226107-50225892 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 96, 174 |
| Conread position: | 367-567 |
| Cow position: | chr5:69535017-69535220 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 374-664 |
| Cow position: | chr5:43115656-43115360 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 119 |
| Conread position: | 382-520 |
| Cow position: | chr5:47883183-47883046 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 453-633 |
| Cow position: | chr5:46413904-46414096 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 500-644 |
| Cow position: | chr5:43440396-43440251 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 25 |
Show alignments to all cow chromosomes.