Cow genome map


           Conread name:
           LyN1-MLN01C120028
        

               Conread position:
               157-566
               

               Cow position:
               chrX:48183881-48184296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               158-566
               

               Cow position:
               chrX:47163032-47163445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               165-439
               

               Cow position:
               chrX:42408161-42407898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               167-321
               

               Cow position:
               chrX:16901438-16901290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               172-343
               

               Cow position:
               chrX:6818369-6818535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               172-348
               

               Cow position:
               chrX:29426859-29427031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               172-352
               

               Cow position:
               chrX:7491702-7491529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               172-372
               

               Cow position:
               chrX:19049123-19048926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               163, 36
               

               Conread position:
               191-375
               

               Cow position:
               chrX:48131753-48131574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               341-566
               

               Cow position:
               chrX:31349537-31349766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               
Show alignments to all cow chromosomes.