Cow genome map

Conread name: LyN1-MLN01D050086

Conread position: 17-458
Cow position: chr1:91972909-91972483 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 289
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 110

Conread position: 20-160
Cow position: chr1:43745707-43745564 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 21-431
Cow position: chr1:92045169-92045561 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 103

Conread position: 22-394
Cow position: chr1:78201063-78201435 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 24-466
Cow position: chr1:78126596-78127020 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 287
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 62

Conread position: 25-202
Cow position: chr1:55115609-55115435 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 63

Conread position: 26-221
Cow position: chr1:24751672-24751480 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 72

Conread position: 26-425
Cow position: chr1:55168059-55167674 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 64

Conread position: 27-267
Cow position: chr1:36663926-36663686 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 67

Conread position: 27-390
Cow position: chr1:76781671-76782030 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 47

Conread position: 27-409
Cow position: chr1:44097029-44097399 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 41

Conread position: 27-426
Cow position: chr1:73688889-73688488 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 267
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 64

Conread position: 27-427
Cow position: chr1:42060289-42059908 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 266
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 73

Conread position: 27-444
Cow position: chr1:60891217-60890805 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 96

Conread position: 27-457
Cow position: chr1:33647773-33647363 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 281
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 28

Conread position: 27-458
Cow position: chr1:579187-578767 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 91

Conread position: 27-460
Cow position: chr1:43583905-43584313 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 104

Conread position: 27-516
Cow position: chr1:54485948-54486432 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 194

Conread position: 28-210
Cow position: chr1:89081649-89081468 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 60

Conread position: 28-286
Cow position: chr1:43589111-43588858 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 124

Conread position: 29-138
Cow position: chr1:14304947-14305056 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 42

Conread position: 29-415
Cow position: chr1:16389526-16389892 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 16, 71

Conread position: 30-221
Cow position: chr1:29726465-29726275 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 98

Conread position: 33-180
Cow position: chr1:91777564-91777711 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 92

Conread position: 35-284
Cow position: chr1:45880286-45880039 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 129

Conread position: 35-520
Cow position: chr1:13565406-13564919 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 93

Conread position: 37-296
Cow position: chr1:40257353-40257095 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 77

Conread position: 39-443
Cow position: chr1:76457727-76458109 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 42-222
Cow position: chr1:73669883-73670059 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 82

Conread position: 43-258
Cow position: chr1:46345756-46345545 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 16, 120

Conread position: 52-357
Cow position: chr1:32959099-32958803 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 111

Conread position: 53-468
Cow position: chr1:87736881-87737300 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 61-434
Cow position: chr1:5438196-5437839 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 48

Conread position: 63-199
Cow position: chr1:89777637-89777772 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 63-357
Cow position: chr1:77954362-77954649 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 63-425
Cow position: chr1:89096907-89096558 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 296, 70

Conread position: 67-280
Cow position: chr1:38335230-38335440 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 100-517
Cow position: chr1:26431825-26432243 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 28

Conread position: 104-525
Cow position: chr1:66600007-66599581 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 22

Conread position: 105-387
Cow position: chr1:15266351-15266070 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 57

Conread position: 113-517
Cow position: chr1:61115772-61116176 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 14

Conread position: 113-522
Cow position: chr1:13697004-13696592 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 116-517
Cow position: chr1:99050655-99050249 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 175, 10

Conread position: 140-479
Cow position: chr1:45181340-45181671 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 148-478
Cow position: chr1:46883528-46883852 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 77

Conread position: 156-468
Cow position: chr1:9154890-9154598 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 64

Conread position: 158-517
Cow position: chr1:27311852-27312224 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 174-512
Cow position: chr1:91032295-91032638 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 44

Conread position: 192-512
Cow position: chr1:7039436-7039119 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 162, 90

Conread position: 199-396
Cow position: chr1:24751346-24751154 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 199-472
Cow position: chr1:47633954-47633681 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 19

Conread position: 214-479
Cow position: chr1:46633679-46633414 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 132, 194

Conread position: 233-520
Cow position: chr1:17622992-17623288 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 86, 97

Conread position: 235-520
Cow position: chr1:17719056-17718765 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 102

Conread position: 309-497
Cow position: chr1:57681534-57681348 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 92

Conread position: 309-517
Cow position: chr1:25389979-25390194 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 86

Conread position: 331-486
Cow position: chr1:25699734-25699575 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 338-495
Cow position: chr1:40257093-40256932 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 357-528
Cow position: chr1:15265958-15265787 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 151, 29

Conread position: 360-476
Cow position: chr1:47016456-47016573 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.