Cow genome map
Conread name: | LyN1-MLN01D050086 |
Conread position: | 17-458 |
Cow position: | chr1:91972909-91972483 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 289 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 29, 110 |
Conread position: | 20-160 |
Cow position: | chr1:43745707-43745564 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 21-431 |
Cow position: | chr1:92045169-92045561 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 290 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 24, 103 |
Conread position: | 22-394 |
Cow position: | chr1:78201063-78201435 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 42 |
Conread position: | 24-466 |
Cow position: | chr1:78126596-78127020 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 287 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 62 |
Conread position: | 25-202 |
Cow position: | chr1:55115609-55115435 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 20, 63 |
Conread position: | 26-221 |
Cow position: | chr1:24751672-24751480 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 22, 72 |
Conread position: | 26-425 |
Cow position: | chr1:55168059-55167674 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 64 |
Conread position: | 27-267 |
Cow position: | chr1:36663926-36663686 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 18, 67 |
Conread position: | 27-390 |
Cow position: | chr1:76781671-76782030 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 251 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 18, 47 |
Conread position: | 27-409 |
Cow position: | chr1:44097029-44097399 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 263 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 18, 41 |
Conread position: | 27-426 |
Cow position: | chr1:73688889-73688488 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 267 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 27-427 |
Cow position: | chr1:42060289-42059908 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 266 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 19, 73 |
Conread position: | 27-444 |
Cow position: | chr1:60891217-60890805 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 96 |
Conread position: | 27-457 |
Cow position: | chr1:33647773-33647363 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 281 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 27-458 |
Cow position: | chr1:579187-578767 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 300 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 21, 91 |
Conread position: | 27-460 |
Cow position: | chr1:43583905-43584313 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 290 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 21, 104 |
Conread position: | 27-516 |
Cow position: | chr1:54485948-54486432 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 194 |
Conread position: | 28-210 |
Cow position: | chr1:89081649-89081468 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 16, 60 |
Conread position: | 28-286 |
Cow position: | chr1:43589111-43588858 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 187 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 17, 124 |
Conread position: | 29-138 |
Cow position: | chr1:14304947-14305056 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 16, 42 |
Conread position: | 29-415 |
Cow position: | chr1:16389526-16389892 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 266 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 16, 71 |
Conread position: | 30-221 |
Cow position: | chr1:29726465-29726275 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 17, 98 |
Conread position: | 33-180 |
Cow position: | chr1:91777564-91777711 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 12, 92 |
Conread position: | 35-284 |
Cow position: | chr1:45880286-45880039 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 10, 129 |
Conread position: | 35-520 |
Cow position: | chr1:13565406-13564919 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 93 |
Conread position: | 37-296 |
Cow position: | chr1:40257353-40257095 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 77 |
Conread position: | 39-443 |
Cow position: | chr1:76457727-76458109 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 55 |
Conread position: | 42-222 |
Cow position: | chr1:73669883-73670059 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 18, 82 |
Conread position: | 43-258 |
Cow position: | chr1:46345756-46345545 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 167 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 16, 120 |
Conread position: | 52-357 |
Cow position: | chr1:32959099-32958803 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 207 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 9, 111 |
Conread position: | 53-468 |
Cow position: | chr1:87736881-87737300 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 36 |
Conread position: | 61-434 |
Cow position: | chr1:5438196-5437839 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 248 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 19, 48 |
Conread position: | 63-199 |
Cow position: | chr1:89777637-89777772 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 63-357 |
Cow position: | chr1:77954362-77954649 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 195 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 63-425 |
Cow position: | chr1:89096907-89096558 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 239 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 296, 70 |
Conread position: | 67-280 |
Cow position: | chr1:38335230-38335440 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 100-517 |
Cow position: | chr1:26431825-26432243 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 28 |
Conread position: | 104-525 |
Cow position: | chr1:66600007-66599581 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 22 |
Conread position: | 105-387 |
Cow position: | chr1:15266351-15266070 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 200 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 42, 57 |
Conread position: | 113-517 |
Cow position: | chr1:61115772-61116176 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 289 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 113-522 |
Cow position: | chr1:13697004-13696592 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 13 |
Conread position: | 116-517 |
Cow position: | chr1:99050655-99050249 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 282 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 175, 10 |
Conread position: | 140-479 |
Cow position: | chr1:45181340-45181671 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 79 |
Conread position: | 148-478 |
Cow position: | chr1:46883528-46883852 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 77 |
Conread position: | 156-468 |
Cow position: | chr1:9154890-9154598 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 230 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 9, 64 |
Conread position: | 158-517 |
Cow position: | chr1:27311852-27312224 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 11 |
Conread position: | 174-512 |
Cow position: | chr1:91032295-91032638 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 44 |
Conread position: | 192-512 |
Cow position: | chr1:7039436-7039119 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 240 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 162, 90 |
Conread position: | 199-396 |
Cow position: | chr1:24751346-24751154 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 199-472 |
Cow position: | chr1:47633954-47633681 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 36, 19 |
Conread position: | 214-479 |
Cow position: | chr1:46633679-46633414 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 183 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 132, 194 |
Conread position: | 233-520 |
Cow position: | chr1:17622992-17623288 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 216 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 86, 97 |
Conread position: | 235-520 |
Cow position: | chr1:17719056-17718765 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 208 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 122, 102 |
Conread position: | 309-497 |
Cow position: | chr1:57681534-57681348 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 49, 92 |
Conread position: | 309-517 |
Cow position: | chr1:25389979-25390194 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 48, 86 |
Conread position: | 331-486 |
Cow position: | chr1:25699734-25699575 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 338-495 |
Cow position: | chr1:40257093-40256932 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 133 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 357-528 |
Cow position: | chr1:15265958-15265787 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 151, 29 |
Conread position: | 360-476 |
Cow position: | chr1:47016456-47016573 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.