Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 15-378 |
| Cow position: | chr11:39660863-39660502 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 20-202 |
| Cow position: | chr11:8796161-8795978 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 20-453 |
| Cow position: | chr11:67545287-67545711 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 29 |
| Conread position: | 21-520 |
| Cow position: | chr11:33913200-33912708 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 24-202 |
| Cow position: | chr11:40621357-40621178 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 25-198 |
| Cow position: | chr11:35732573-35732748 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 25-391 |
| Cow position: | chr11:73450076-73450425 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 25-458 |
| Cow position: | chr11:26368600-26368152 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 25-553 |
| Cow position: | chr11:53680385-53679859 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 26-409 |
| Cow position: | chr11:16197353-16197711 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 26-415 |
| Cow position: | chr11:43508696-43509075 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 26-434 |
| Cow position: | chr11:21621821-21622215 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 27-173 |
| Cow position: | chr11:17368198-17368053 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 27-261 |
| Cow position: | chr11:83790002-83789776 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 27-409 |
| Cow position: | chr11:82102627-82102996 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 27-434 |
| Cow position: | chr11:64125547-64125146 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 27-457 |
| Cow position: | chr11:55010512-55010926 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 28-427 |
| Cow position: | chr11:37489831-37489435 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 34-215 |
| Cow position: | chr11:41459807-41459989 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 130 |
| Conread position: | 46-264 |
| Cow position: | chr11:72088208-72088419 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 53-385 |
| Cow position: | chr11:32066249-32065931 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 53-444 |
| Cow position: | chr11:43253001-43252597 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 61-233 |
| Cow position: | chr11:32601201-32601035 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 63-517 |
| Cow position: | chr11:13737789-13737334 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 101 |
| Conread position: | 65-517 |
| Cow position: | chr11:86669150-86668706 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 69-437 |
| Cow position: | chr11:48662444-48662793 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 162, 20 |
| Conread position: | 113-364 |
| Cow position: | chr11:40640903-40641148 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 113-437 |
| Cow position: | chr11:21911335-21911658 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 113-478 |
| Cow position: | chr11:66888646-66888281 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 131-481 |
| Cow position: | chr11:32085033-32085384 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 138-498 |
| Cow position: | chr11:5177616-5177989 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 147, 26 |
| Conread position: | 170-444 |
| Cow position: | chr11:68627349-68627631 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 172-444 |
| Cow position: | chr11:19675708-19675438 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 200-445 |
| Cow position: | chr11:5608738-5608989 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 220-479 |
| Cow position: | chr11:59958717-59958977 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 257-517 |
| Cow position: | chr11:916943-916685 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 260-490 |
| Cow position: | chr11:64080683-64080907 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 310-517 |
| Cow position: | chr11:41460003-41460220 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 330-517 |
| Cow position: | chr11:50148182-50148374 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 387-497 |
| Cow position: | chr11:67271332-67271441 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.