Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 21-416 |
| Cow position: | chr13:31495161-31494785 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 22-515 |
| Cow position: | chr13:56680691-56680211 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 23-498 |
| Cow position: | chr13:262928-262463 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 25-201 |
| Cow position: | chr13:33191952-33191777 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 26-202 |
| Cow position: | chr13:47645792-47645617 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 26-434 |
| Cow position: | chr13:12485058-12484651 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 26-526 |
| Cow position: | chr13:14699576-14699087 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 27-192 |
| Cow position: | chr13:20606800-20606637 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 27-199 |
| Cow position: | chr13:646358-646188 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 27-378 |
| Cow position: | chr13:42571326-42570989 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 27-385 |
| Cow position: | chr13:20087391-20087047 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 27-409 |
| Cow position: | chr13:8617467-8617105 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 27-511 |
| Cow position: | chr13:28091272-28091729 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 29-409 |
| Cow position: | chr13:41843537-41843169 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 29-413 |
| Cow position: | chr13:19546083-19546460 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 29-507 |
| Cow position: | chr13:28591842-28592278 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 34-458 |
| Cow position: | chr13:61030673-61031086 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 35-264 |
| Cow position: | chr13:15591194-15591422 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 40-434 |
| Cow position: | chr13:30765978-30765597 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 46-262 |
| Cow position: | chr13:52317757-52317543 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 56-517 |
| Cow position: | chr13:38463254-38463700 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 69 |
| Conread position: | 62-533 |
| Cow position: | chr13:39903936-39903482 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 64-436 |
| Cow position: | chr13:34348786-34348427 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 71-520 |
| Cow position: | chr13:60312687-60312242 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 93 |
| Conread position: | 98-475 |
| Cow position: | chr13:35752011-35751640 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 104-444 |
| Cow position: | chr13:25788264-25788609 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 113-478 |
| Cow position: | chr13:25415314-25415693 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 116-377 |
| Cow position: | chr13:12701989-12702249 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 224, 10 |
| Conread position: | 147-439 |
| Cow position: | chr13:2215280-2214985 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 152-467 |
| Cow position: | chr13:54407882-54408178 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 170-516 |
| Cow position: | chr13:2360707-2360360 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 48 |
| Conread position: | 178-517 |
| Cow position: | chr13:51905398-51905731 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 180-517 |
| Cow position: | chr13:44800677-44800338 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 212, 38 |
| Conread position: | 185-517 |
| Cow position: | chr13:11547973-11547638 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 33 |
| Conread position: | 193-530 |
| Cow position: | chr13:51120797-51121134 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 200-496 |
| Cow position: | chr13:7333230-7333539 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 200-517 |
| Cow position: | chr13:54453580-54453256 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 285 |
| Conread position: | 210-474 |
| Cow position: | chr13:62682885-62683150 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 147, 7 |
| Conread position: | 310-507 |
| Cow position: | chr13:19859141-19859338 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 27 |
Show alignments to all cow chromosomes.