Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 14-458 |
| Cow position: | chr16:24570923-24571386 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 16-409 |
| Cow position: | chr16:52928096-52928485 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 21-269 |
| Cow position: | chr16:16332025-16332273 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 143 |
| Conread position: | 26-162 |
| Cow position: | chr16:29182300-29182437 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 26-279 |
| Cow position: | chr16:33129014-33129262 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 26-437 |
| Cow position: | chr16:5249800-5249407 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 26-517 |
| Cow position: | chr16:12309361-12308884 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 27-204 |
| Cow position: | chr16:32174044-32173868 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 27-205 |
| Cow position: | chr16:18287777-18287952 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 27-244 |
| Cow position: | chr16:54011846-54011630 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 27-326 |
| Cow position: | chr16:36918561-36918845 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 27-458 |
| Cow position: | chr16:9252228-9252666 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 27-458 |
| Cow position: | chr16:45573211-45572781 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 27-479 |
| Cow position: | chr16:40009422-40009854 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 35-222 |
| Cow position: | chr16:56599160-56599348 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 36-437 |
| Cow position: | chr16:19711141-19711513 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 38-357 |
| Cow position: | chr16:51098258-51098565 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 61-348 |
| Cow position: | chr16:27159111-27159390 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 63-410 |
| Cow position: | chr16:49898259-49898589 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 64-484 |
| Cow position: | chr16:17034562-17034158 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 12 |
| Conread position: | 68-516 |
| Cow position: | chr16:12136369-12135902 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 71-520 |
| Cow position: | chr16:6920246-6920693 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 91 |
| Conread position: | 96-517 |
| Cow position: | chr16:4550732-4550315 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 108-458 |
| Cow position: | chr16:9574695-9575044 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 170, 56 |
| Conread position: | 113-498 |
| Cow position: | chr16:24024052-24023665 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 113-498 |
| Cow position: | chr16:50503111-50502737 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 113-521 |
| Cow position: | chr16:10693667-10694042 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 113-525 |
| Cow position: | chr16:40523320-40522903 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 115-517 |
| Cow position: | chr16:19827436-19827827 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 131-517 |
| Cow position: | chr16:18054087-18053696 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 208 |
| Conread position: | 165-438 |
| Cow position: | chr16:50281112-50280857 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 170-382 |
| Cow position: | chr16:33657111-33656900 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 182, 35 |
| Conread position: | 172-479 |
| Cow position: | chr16:19898275-19897964 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 172-517 |
| Cow position: | chr16:9849176-9848838 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 182, 52 |
| Conread position: | 181-437 |
| Cow position: | chr16:56685305-56685054 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 186-458 |
| Cow position: | chr16:30800378-30800108 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 190-439 |
| Cow position: | chr16:10670642-10670397 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 201-520 |
| Cow position: | chr16:16679976-16680287 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 381-517 |
| Cow position: | chr16:33656670-33656534 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 127, 97 |
| Conread position: | 392-498 |
| Cow position: | chr16:24708594-24708700 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.