Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 20-292 |
| Cow position: | chr17:10049190-10048918 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 20-460 |
| Cow position: | chr17:20318404-20317976 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 21-281 |
| Cow position: | chr17:18888023-18888276 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 23-480 |
| Cow position: | chr17:1759069-1759518 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 25-281 |
| Cow position: | chr17:22519845-22520103 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 25-523 |
| Cow position: | chr17:1262561-1262080 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 142 |
| Conread position: | 26-517 |
| Cow position: | chr17:1230586-1230104 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 27-258 |
| Cow position: | chr17:1554690-1554476 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 27-391 |
| Cow position: | chr17:33244439-33244797 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 27-409 |
| Cow position: | chr17:21613330-21613699 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 36-222 |
| Cow position: | chr17:20194432-20194244 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 43-199 |
| Cow position: | chr17:22873059-22872906 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 43-374 |
| Cow position: | chr17:31996572-31996904 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 47-517 |
| Cow position: | chr17:11242342-11242801 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 61-357 |
| Cow position: | chr17:21605653-21605365 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 237, 65 |
| Conread position: | 63-456 |
| Cow position: | chr17:38875207-38874831 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 63-458 |
| Cow position: | chr17:14610370-14609992 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 91-522 |
| Cow position: | chr17:13321787-13322220 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 104-486 |
| Cow position: | chr17:24816080-24815704 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 113-356 |
| Cow position: | chr17:36657431-36657195 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 113-410 |
| Cow position: | chr17:42010584-42010875 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 113-441 |
| Cow position: | chr17:25572832-25573155 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 129-494 |
| Cow position: | chr17:16387029-16387382 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 154-405 |
| Cow position: | chr17:36036594-36036859 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 159-478 |
| Cow position: | chr17:22872510-22872207 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 190-384 |
| Cow position: | chr17:34653537-34653338 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 190-517 |
| Cow position: | chr17:20185303-20184998 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 182, 28 |
| Conread position: | 258-475 |
| Cow position: | chr17:34943033-34942832 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 278-441 |
| Cow position: | chr17:10048698-10048542 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 340-516 |
| Cow position: | chr17:36657052-36656874 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 11 |
Show alignments to all cow chromosomes.