Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 16-215 |
| Cow position: | chr2:57382073-57381878 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 20-220 |
| Cow position: | chr2:79217888-79218081 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 137 |
| Conread position: | 20-520 |
| Cow position: | chr2:58536766-58536255 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 21-325 |
| Cow position: | chr2:66059127-66059417 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 21-409 |
| Cow position: | chr2:39790104-39790474 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 21-457 |
| Cow position: | chr2:2073263-2072834 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 25-192 |
| Cow position: | chr2:36856973-36856806 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 26-380 |
| Cow position: | chr2:19508875-19508529 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 26-457 |
| Cow position: | chr2:61464075-61464497 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 354, 88 |
| Conread position: | 26-457 |
| Cow position: | chr2:63090755-63090338 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 27-158 |
| Cow position: | chr2:73112887-73112754 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 27-160 |
| Cow position: | chr2:42240729-42240863 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 27-199 |
| Cow position: | chr2:82928290-82928460 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 27-222 |
| Cow position: | chr2:40973055-40973245 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 27-278 |
| Cow position: | chr2:15863923-15863676 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 27-278 |
| Cow position: | chr2:16364564-16364320 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 27-378 |
| Cow position: | chr2:8513642-8513983 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 27-388 |
| Cow position: | chr2:39580512-39580167 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 27-421 |
| Cow position: | chr2:65780918-65780526 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 70 |
| Conread position: | 27-424 |
| Cow position: | chr2:86527557-86527944 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 27-425 |
| Cow position: | chr2:6938629-6939013 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 27-437 |
| Cow position: | chr2:44204467-44204071 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 27-437 |
| Cow position: | chr2:45308502-45308896 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 27-458 |
| Cow position: | chr2:40474238-40473821 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 27-477 |
| Cow position: | chr2:10144253-10144706 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 28-281 |
| Cow position: | chr2:76037985-76037734 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 28-454 |
| Cow position: | chr2:36584842-36584429 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 29-164 |
| Cow position: | chr2:66490875-66491012 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 29-210 |
| Cow position: | chr2:38648543-38648360 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 135 |
| Conread position: | 29-275 |
| Cow position: | chr2:82113672-82113440 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 29-405 |
| Cow position: | chr2:49983425-49983788 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 32-433 |
| Cow position: | chr2:48859181-48859579 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 35-286 |
| Cow position: | chr2:82137623-82137374 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 37-216 |
| Cow position: | chr2:17948787-17948964 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 39-222 |
| Cow position: | chr2:14956861-14957048 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 43-457 |
| Cow position: | chr2:66856767-66856368 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 46-458 |
| Cow position: | chr2:23608157-23607764 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 237, 28 |
| Conread position: | 47-488 |
| Cow position: | chr2:37571727-37571288 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 118 |
| Conread position: | 58-469 |
| Cow position: | chr2:69641260-69641665 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 61-434 |
| Cow position: | chr2:38345761-38345418 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 339, 52 |
| Conread position: | 62-222 |
| Cow position: | chr2:64167899-64167742 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 63-203 |
| Cow position: | chr2:70228216-70228347 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 63-281 |
| Cow position: | chr2:81154544-81154326 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 103 |
| Conread position: | 93-507 |
| Cow position: | chr2:41060938-41061338 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 96-511 |
| Cow position: | chr2:85012059-85011655 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 104-516 |
| Cow position: | chr2:27757437-27757851 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 113-321 |
| Cow position: | chr2:69760748-69760949 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 113-418 |
| Cow position: | chr2:39513250-39512946 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 113-515 |
| Cow position: | chr2:41124540-41124931 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 13 |
| Conread position: | 114-498 |
| Cow position: | chr2:78809414-78809804 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 115-467 |
| Cow position: | chr2:44079023-44078688 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 149-453 |
| Cow position: | chr2:33204406-33204698 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 152-399 |
| Cow position: | chr2:38177946-38177695 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 181, 12 |
| Conread position: | 173-517 |
| Cow position: | chr2:58971018-58971365 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 182-458 |
| Cow position: | chr2:61681083-61680806 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 36 |
| Conread position: | 235-521 |
| Cow position: | chr2:50811409-50811141 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 307-517 |
| Cow position: | chr2:66059534-66059748 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 309-496 |
| Cow position: | chr2:46279521-46279333 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 309-507 |
| Cow position: | chr2:82187845-82187646 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 310-531 |
| Cow position: | chr2:82113438-82113215 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 331-517 |
| Cow position: | chr2:16364319-16364137 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 380-530 |
| Cow position: | chr2:49821933-49821783 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 117, 96 |
| Conread position: | 387-517 |
| Cow position: | chr2:38177526-38177397 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 56 |
Show alignments to all cow chromosomes.