Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 17-124 |
| Cow position: | chr25:13249444-13249554 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-279 |
| Cow position: | chr25:36157894-36157642 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 100, 121 |
| Conread position: | 27-199 |
| Cow position: | chr25:12092988-12092816 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 27-270 |
| Cow position: | chr25:11486822-11487063 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 27-282 |
| Cow position: | chr25:40632470-40632227 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 27-410 |
| Cow position: | chr25:2501519-2501155 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 27-458 |
| Cow position: | chr25:12409420-12408996 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 298 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 27-479 |
| Cow position: | chr25:16143886-16144349 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 27-517 |
| Cow position: | chr25:13847167-13847664 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 27-517 |
| Cow position: | chr25:31537042-31537542 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 27-520 |
| Cow position: | chr25:21158094-21157596 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 139 |
| Conread position: | 29-186 |
| Cow position: | chr25:9835835-9835983 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 45-459 |
| Cow position: | chr25:8547762-8547343 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 47-223 |
| Cow position: | chr25:23205672-23205496 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 54-285 |
| Cow position: | chr25:18563649-18563417 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 175 |
| Conread position: | 55-486 |
| Cow position: | chr25:7511538-7511962 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 59-202 |
| Cow position: | chr25:12142791-12142651 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 60-517 |
| Cow position: | chr25:15661969-15662405 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 111 |
| Conread position: | 63-517 |
| Cow position: | chr25:13693627-13694074 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 82-289 |
| Cow position: | chr25:11408744-11408947 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 79 |
| Conread position: | 104-279 |
| Cow position: | chr25:21518193-21518373 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 104-378 |
| Cow position: | chr25:15446940-15447214 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 113-498 |
| Cow position: | chr25:19140473-19140084 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 105 |
| Conread position: | 138-327 |
| Cow position: | chr25:7737077-7737263 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 142-350 |
| Cow position: | chr25:13733779-13733979 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 172-444 |
| Cow position: | chr25:15478284-15478561 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 190-517 |
| Cow position: | chr25:12090080-12089766 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 191-516 |
| Cow position: | chr25:14939380-14939708 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 66 |
| Conread position: | 222-444 |
| Cow position: | chr25:7226294-7226070 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 67 |
| Conread position: | 278-517 |
| Cow position: | chr25:13250334-13250580 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 350-484 |
| Cow position: | chr25:20374226-20374094 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 353-498 |
| Cow position: | chr25:13734122-13734270 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 0 |
Show alignments to all cow chromosomes.