Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 20-520 |
| Cow position: | chr4:35583796-35583313 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 21-520 |
| Cow position: | chr4:43705678-43705182 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 23-202 |
| Cow position: | chr4:205982-205806 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 120, 66 |
| Conread position: | 26-160 |
| Cow position: | chr4:55487654-55487519 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 26-409 |
| Cow position: | chr4:43404120-43404488 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 26-520 |
| Cow position: | chr4:17640127-17640608 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 27-197 |
| Cow position: | chr4:42962422-42962253 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 27-281 |
| Cow position: | chr4:68407500-68407251 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 27-517 |
| Cow position: | chr4:34914149-34914642 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 27-517 |
| Cow position: | chr4:63540827-63541315 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 29-444 |
| Cow position: | chr4:23686801-23686383 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 245 |
| Conread position: | 35-205 |
| Cow position: | chr4:65108918-65108749 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 35-333 |
| Cow position: | chr4:35047008-35046722 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 35-395 |
| Cow position: | chr4:11011530-11011876 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 39-262 |
| Cow position: | chr4:67313781-67313565 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 43-480 |
| Cow position: | chr4:29987650-29988088 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 309, 414 |
| Conread position: | 61-357 |
| Cow position: | chr4:26692265-26692555 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 102 |
| Conread position: | 64-222 |
| Cow position: | chr4:10860980-10861134 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 106-459 |
| Cow position: | chr4:32300650-32301002 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 113-444 |
| Cow position: | chr4:44131629-44131968 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 241, 12 |
| Conread position: | 113-458 |
| Cow position: | chr4:13391299-13390955 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 113-469 |
| Cow position: | chr4:23594949-23594614 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 113-512 |
| Cow position: | chr4:7175838-7176235 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 114-520 |
| Cow position: | chr4:565983-566400 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 133-458 |
| Cow position: | chr4:64163456-64163133 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 133-517 |
| Cow position: | chr4:45940418-45940798 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 28 |
| Conread position: | 157-335 |
| Cow position: | chr4:17042737-17042561 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 158-497 |
| Cow position: | chr4:20329022-20328688 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 60 |
| Conread position: | 170-439 |
| Cow position: | chr4:5300099-5300359 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 214, 47 |
| Conread position: | 179-456 |
| Cow position: | chr4:37647348-37647621 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 182-427 |
| Cow position: | chr4:34270185-34269939 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 172, 36 |
| Conread position: | 237-458 |
| Cow position: | chr4:66013611-66013828 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 257-523 |
| Cow position: | chr4:205780-205515 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 264-423 |
| Cow position: | chr4:54928359-54928508 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 282-520 |
| Cow position: | chr4:47032134-47031902 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 301-515 |
| Cow position: | chr4:54863701-54863914 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 315-498 |
| Cow position: | chr4:23086501-23086683 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 350-517 |
| Cow position: | chr4:34611784-34611619 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 353-530 |
| Cow position: | chr4:65107903-65107727 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 134, 41 |
Show alignments to all cow chromosomes.