Cow genome map
| Conread name: | LyN1-MLN01D050086 |
| Conread position: | 20-525 |
| Cow position: | chr5:42536633-42537111 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 22-529 |
| Cow position: | chr5:52002785-52003288 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 25-378 |
| Cow position: | chr5:32043156-32043521 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 25-388 |
| Cow position: | chr5:36670380-36670021 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 25-438 |
| Cow position: | chr5:50583160-50583574 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 26-202 |
| Cow position: | chr5:28275525-28275353 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 26-520 |
| Cow position: | chr5:57485073-57484598 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 27-158 |
| Cow position: | chr5:28817481-28817613 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 27-162 |
| Cow position: | chr5:65316077-65315944 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 27-222 |
| Cow position: | chr5:51577257-51577061 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 27-286 |
| Cow position: | chr5:56623419-56623674 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 27-437 |
| Cow position: | chr5:42714532-42714144 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 27-447 |
| Cow position: | chr5:69526556-69526963 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 27-485 |
| Cow position: | chr5:54997325-54997755 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 27-498 |
| Cow position: | chr5:31569953-31569480 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 151 |
| Conread position: | 27-517 |
| Cow position: | chr5:3578878-3578383 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 177 |
| Conread position: | 27-517 |
| Cow position: | chr5:29572188-29571696 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 139 |
| Conread position: | 28-440 |
| Cow position: | chr5:63407829-63408224 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 29-284 |
| Cow position: | chr5:29373213-29372966 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 29-520 |
| Cow position: | chr5:73572851-73572362 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 30-444 |
| Cow position: | chr5:9501301-9501709 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 32-498 |
| Cow position: | chr5:63141950-63142405 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 19 |
| Conread position: | 35-520 |
| Cow position: | chr5:44877767-44878252 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 36-187 |
| Cow position: | chr5:63798056-63798209 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 50-517 |
| Cow position: | chr5:61482753-61482295 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 53-444 |
| Cow position: | chr5:55715560-55715168 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 35 |
| Conread position: | 59-429 |
| Cow position: | chr5:60971726-60971355 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 61-436 |
| Cow position: | chr5:2424928-2425288 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 63-452 |
| Cow position: | chr5:30643788-30643402 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 64-433 |
| Cow position: | chr5:57494178-57493817 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 66-409 |
| Cow position: | chr5:48478914-48478588 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 74-418 |
| Cow position: | chr5:63307957-63308298 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 78-191 |
| Cow position: | chr5:71528566-71528676 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 96-517 |
| Cow position: | chr5:46844218-46844646 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 104-517 |
| Cow position: | chr5:48135046-48135461 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 21 |
| Conread position: | 113-352 |
| Cow position: | chr5:56482281-56482047 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 113-517 |
| Cow position: | chr5:26555056-26554674 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 113-517 |
| Cow position: | chr5:36247147-36247543 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 120-335 |
| Cow position: | chr5:9328968-9329182 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 158, 42 |
| Conread position: | 129-498 |
| Cow position: | chr5:51171674-51172044 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 154-429 |
| Cow position: | chr5:62026438-62026158 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 185-519 |
| Cow position: | chr5:34497891-34498199 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 293, 33 |
| Conread position: | 308-520 |
| Cow position: | chr5:47969328-47969120 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 18 |
| Conread position: | 383-479 |
| Cow position: | chr5:56481443-56481347 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.