Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 1-383 |
| Cow position: | chr10:38450968-38451355 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 16-309 |
| Cow position: | chr10:45311091-45310792 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 30-333 |
| Cow position: | chr10:20537826-20538126 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 93 |
| Conread position: | 30-382 |
| Cow position: | chr10:8291505-8291865 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 273 |
| Conread position: | 30-383 |
| Cow position: | chr10:7897024-7896655 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 30-383 |
| Cow position: | chr10:14334376-14334020 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 30-383 |
| Cow position: | chr10:21488416-21488782 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 30-383 |
| Cow position: | chr10:22102696-22103058 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 30-383 |
| Cow position: | chr10:25651971-25651603 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr10:30684034-30683665 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 206 |
| Conread position: | 30-383 |
| Cow position: | chr10:33870743-33871111 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 30-383 |
| Cow position: | chr10:37771343-37771710 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr10:38343899-38343540 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 129, 67 |
| Conread position: | 30-383 |
| Cow position: | chr10:39439610-39439978 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 215 |
| Conread position: | 30-383 |
| Cow position: | chr10:39814940-39814573 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 231 |
| Conread position: | 30-383 |
| Cow position: | chr10:57988536-57988169 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 30-383 |
| Cow position: | chr10:62407319-62406956 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 30-387 |
| Cow position: | chr10:44708153-44707787 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 63, 245 |
| Conread position: | 30-390 |
| Cow position: | chr10:39877960-39877591 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 336 |
| Conread position: | 30-393 |
| Cow position: | chr10:46192604-46192981 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 30-393 |
| Cow position: | chr10:64220969-64220614 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 230, 40 |
| Conread position: | 31-383 |
| Cow position: | chr10:39778662-39778306 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 34-383 |
| Cow position: | chr10:29845190-29844832 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 35-311 |
| Cow position: | chr10:7477855-7477575 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 35-386 |
| Cow position: | chr10:41387509-41387156 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 35-392 |
| Cow position: | chr10:41717236-41717600 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 75, 277 |
| Conread position: | 36-387 |
| Cow position: | chr10:19721628-19721271 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 37-383 |
| Cow position: | chr10:29011203-29010844 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 267 |
| Conread position: | 40-355 |
| Cow position: | chr10:44102602-44102929 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 197 |
| Conread position: | 42-383 |
| Cow position: | chr10:46183921-46184271 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 42-393 |
| Cow position: | chr10:29722582-29722215 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 296 |
| Conread position: | 54-338 |
| Cow position: | chr10:10242413-10242713 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 54-383 |
| Cow position: | chr10:39039816-39039490 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 56-392 |
| Cow position: | chr10:22677440-22677770 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 59-383 |
| Cow position: | chr10:8325615-8325287 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 60-383 |
| Cow position: | chr10:41158901-41159239 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 73-366 |
| Cow position: | chr10:60768580-60768870 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 98 |
| Conread position: | 87-383 |
| Cow position: | chr10:23409722-23409424 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 140-363 |
| Cow position: | chr10:57089539-57089767 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 147-393 |
| Cow position: | chr10:2133642-2133395 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 148-393 |
| Cow position: | chr10:40822815-40822568 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 115 |
| Conread position: | 158-309 |
| Cow position: | chr10:28709901-28710053 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 166-316 |
| Cow position: | chr10:38865697-38865848 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 171-378 |
| Cow position: | chr10:13218410-13218205 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 171-389 |
| Cow position: | chr10:40641561-40641777 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 175, 91 |
| Conread position: | 181-426 |
| Cow position: | chr10:58356900-58356659 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 82 |
| Conread position: | 184-383 |
| Cow position: | chr10:6535345-6535545 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.