Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 11-383 |
| Cow position: | chr12:21428214-21427840 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 175, 244 |
| Conread position: | 18-383 |
| Cow position: | chr12:30677012-30677390 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 140, 11 |
| Conread position: | 30-382 |
| Cow position: | chr12:42858151-42857783 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 203 |
| Conread position: | 30-383 |
| Cow position: | chr12:3362326-3362687 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 30-383 |
| Cow position: | chr12:21429393-21429761 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-393 |
| Cow position: | chr12:15078233-15078594 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 181 |
| Conread position: | 30-393 |
| Cow position: | chr12:32654941-32655313 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 34-383 |
| Cow position: | chr12:22204323-22203960 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 52, 296 |
| Conread position: | 34-383 |
| Cow position: | chr12:22568366-22568005 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 303 |
| Conread position: | 34-383 |
| Cow position: | chr12:24994574-24994210 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 234 |
| Conread position: | 35-383 |
| Cow position: | chr12:27854574-27854212 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-383 |
| Cow position: | chr12:8138745-8138406 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 40-383 |
| Cow position: | chr12:42606853-42606498 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 54-383 |
| Cow position: | chr12:6405227-6404886 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 141 |
| Conread position: | 70-393 |
| Cow position: | chr12:24929068-24928738 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 74-429 |
| Cow position: | chr12:41465085-41464719 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 79-424 |
| Cow position: | chr12:10679983-10679631 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 166-378 |
| Cow position: | chr12:39038931-39038720 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 174-384 |
| Cow position: | chr12:8891413-8891205 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 175-383 |
| Cow position: | chr12:11193818-11194022 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 175-383 |
| Cow position: | chr12:11205089-11205293 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 88 |
| Conread position: | 176-383 |
| Cow position: | chr12:21253041-21252834 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 194 |
| Conread position: | 176-384 |
| Cow position: | chr12:22519435-22519226 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-383 |
| Cow position: | chr12:3209523-3209722 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 235-392 |
| Cow position: | chr12:38345058-38344901 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 48 |
Show alignments to all cow chromosomes.