Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 9-391 |
| Cow position: | chr13:14186143-14186541 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 237 |
| Conread position: | 30-382 |
| Cow position: | chr13:14401941-14401576 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 30-383 |
| Cow position: | chr13:5500833-5500466 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 30-383 |
| Cow position: | chr13:21697429-21697797 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr13:31508075-31508439 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 106 |
| Conread position: | 30-383 |
| Cow position: | chr13:35758451-35758813 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 30-383 |
| Cow position: | chr13:46527614-46527976 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 30-390 |
| Cow position: | chr13:13326094-13326466 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 30-391 |
| Cow position: | chr13:34030772-34031140 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 30-392 |
| Cow position: | chr13:43590489-43590853 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 31-393 |
| Cow position: | chr13:44752134-44752505 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 34-333 |
| Cow position: | chr13:14177680-14177372 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 34-338 |
| Cow position: | chr13:34377689-34377391 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 34-383 |
| Cow position: | chr13:30276150-30275806 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 137 |
| Conread position: | 34-383 |
| Cow position: | chr13:34041165-34040800 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 34-391 |
| Cow position: | chr13:37835150-37834782 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 34-392 |
| Cow position: | chr13:61051869-61051510 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 35-379 |
| Cow position: | chr13:3534710-3534361 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 35-396 |
| Cow position: | chr13:11071100-11070748 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 40-383 |
| Cow position: | chr13:34343081-34343439 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 40-383 |
| Cow position: | chr13:34938619-34938971 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 40-387 |
| Cow position: | chr13:32179590-32179949 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 40-391 |
| Cow position: | chr13:11739095-11739455 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 42-383 |
| Cow position: | chr13:33524777-33524423 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 42-394 |
| Cow position: | chr13:16816271-16816625 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 44-383 |
| Cow position: | chr13:49494997-49494646 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 48-383 |
| Cow position: | chr13:31729710-31729371 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 153 |
| Conread position: | 54-383 |
| Cow position: | chr13:33335121-33334788 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 54-383 |
| Cow position: | chr13:50193206-50192865 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 54-392 |
| Cow position: | chr13:4193501-4193167 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 54-392 |
| Cow position: | chr13:44652650-44652314 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 55-392 |
| Cow position: | chr13:21839008-21838665 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 75-383 |
| Cow position: | chr13:11388208-11388530 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 166-393 |
| Cow position: | chr13:11763318-11763090 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 186-393 |
| Cow position: | chr13:19128300-19128093 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 187-383 |
| Cow position: | chr13:1048680-1048489 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 209-383 |
| Cow position: | chr13:3760271-3760096 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.