Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 18-383 |
| Cow position: | chr15:31359897-31360270 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 142, 75 |
| Conread position: | 29-393 |
| Cow position: | chr15:3777640-3777273 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 85, 187 |
| Conread position: | 30-338 |
| Cow position: | chr15:2013597-2013922 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 30-382 |
| Cow position: | chr15:33122416-33122783 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:107039-107407 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:4197505-4197873 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 293 |
| Conread position: | 30-383 |
| Cow position: | chr15:4672472-4672839 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 208 |
| Conread position: | 30-383 |
| Cow position: | chr15:4962671-4963019 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 30-383 |
| Cow position: | chr15:6561625-6561993 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 30-383 |
| Cow position: | chr15:19737017-19736649 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:20411636-20412002 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:25205966-25205600 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 30-383 |
| Cow position: | chr15:35898738-35898370 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:41659206-41659574 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr15:51218762-51219130 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 30-388 |
| Cow position: | chr15:45790948-45791314 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 110 |
| Conread position: | 30-389 |
| Cow position: | chr15:38651231-38651607 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 278 |
| Conread position: | 30-391 |
| Cow position: | chr15:17036618-17036240 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 30-403 |
| Cow position: | chr15:13075046-13075421 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 96, 241 |
| Conread position: | 30-404 |
| Cow position: | chr15:1833601-1833209 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 206 |
| Conread position: | 34-267 |
| Cow position: | chr15:29866677-29866430 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 34-383 |
| Cow position: | chr15:4923188-4923551 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 34-383 |
| Cow position: | chr15:24296133-24296493 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 192 |
| Conread position: | 34-424 |
| Cow position: | chr15:24169185-24168782 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 40-381 |
| Cow position: | chr15:2926361-2926695 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 40-383 |
| Cow position: | chr15:1318473-1318823 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 127, 88 |
| Conread position: | 40-383 |
| Cow position: | chr15:2646601-2646247 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 40-383 |
| Cow position: | chr15:4726250-4726608 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 40-387 |
| Cow position: | chr15:29333744-29333388 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 40-392 |
| Cow position: | chr15:6383103-6382746 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 40-392 |
| Cow position: | chr15:25106145-25105781 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 40-408 |
| Cow position: | chr15:25319275-25318911 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 54-392 |
| Cow position: | chr15:6459961-6460301 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 55-375 |
| Cow position: | chr15:10862740-10862422 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 55-380 |
| Cow position: | chr15:31846509-31846849 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 140 |
| Conread position: | 73-366 |
| Cow position: | chr15:53313793-53314087 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 86, 67 |
| Conread position: | 76-392 |
| Cow position: | chr15:50869423-50869751 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 86-383 |
| Cow position: | chr15:3890008-3890310 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 242 |
| Conread position: | 144-389 |
| Cow position: | chr15:25663873-25664114 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 197, 41 |
| Conread position: | 149-383 |
| Cow position: | chr15:51613309-51613543 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 111, 170 |
| Conread position: | 149-391 |
| Cow position: | chr15:13390153-13389907 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 154-426 |
| Cow position: | chr15:21915176-21915453 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 217 |
| Conread position: | 158-333 |
| Cow position: | chr15:35272295-35272471 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 165-393 |
| Cow position: | chr15:33494840-33495070 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 177-389 |
| Cow position: | chr15:4081036-4080823 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 184-383 |
| Cow position: | chr15:4686935-4687136 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 185-382 |
| Cow position: | chr15:1783538-1783736 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.