Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 29-387 |
| Cow position: | chr17:44926063-44925698 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 30-261 |
| Cow position: | chr17:37214-37447 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 30-383 |
| Cow position: | chr17:182846-183209 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 30-383 |
| Cow position: | chr17:2263411-2263777 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 107, 291 |
| Conread position: | 30-383 |
| Cow position: | chr17:6261131-6261497 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 30-383 |
| Cow position: | chr17:13967197-13967564 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 30-383 |
| Cow position: | chr17:34157392-34157759 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 346 |
| Conread position: | 30-383 |
| Cow position: | chr17:39049485-39049855 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr17:43989774-43990140 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 34-383 |
| Cow position: | chr17:11086449-11086089 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 34-383 |
| Cow position: | chr17:31094508-31094152 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 34-383 |
| Cow position: | chr17:38946635-38946990 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 36-363 |
| Cow position: | chr17:28874191-28873864 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 40-383 |
| Cow position: | chr17:15326559-15326919 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 315 |
| Conread position: | 40-383 |
| Cow position: | chr17:23323168-23322810 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 191 |
| Conread position: | 41-313 |
| Cow position: | chr17:39453380-39453664 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 42-426 |
| Cow position: | chr17:36001768-36001370 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 48-391 |
| Cow position: | chr17:14936682-14936325 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 54-375 |
| Cow position: | chr17:3654995-3654659 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 54-383 |
| Cow position: | chr17:19267537-19267207 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 54-391 |
| Cow position: | chr17:27793487-27793134 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 56-381 |
| Cow position: | chr17:1538444-1538119 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 73-338 |
| Cow position: | chr17:14269636-14269362 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 82-389 |
| Cow position: | chr17:6626635-6626946 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 94-393 |
| Cow position: | chr17:3326467-3326776 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 163-431 |
| Cow position: | chr17:15685824-15686095 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 165-389 |
| Cow position: | chr17:18191498-18191717 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 166-383 |
| Cow position: | chr17:39860-40078 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 166-383 |
| Cow position: | chr17:14295139-14294916 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 186 |
| Conread position: | 166-392 |
| Cow position: | chr17:24335980-24336200 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 173-383 |
| Cow position: | chr17:41337350-41337152 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 176-382 |
| Cow position: | chr17:4346149-4345942 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 176-391 |
| Cow position: | chr17:19980706-19980490 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-392 |
| Cow position: | chr17:17257260-17257043 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 185-392 |
| Cow position: | chr17:6121224-6121433 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 208-392 |
| Cow position: | chr17:11784329-11784514 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.