Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 1-391 |
| Cow position: | chr18:24617586-24617990 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 10-383 |
| Cow position: | chr18:54170044-54169677 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 13-272 |
| Cow position: | chr18:24574489-24574244 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 30-261 |
| Cow position: | chr18:38342814-38342581 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 30-383 |
| Cow position: | chr18:23799128-23799490 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 30-383 |
| Cow position: | chr18:29238374-29238732 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 30-383 |
| Cow position: | chr18:29865131-29864765 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 30-383 |
| Cow position: | chr18:33270397-33270745 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 209, 63 |
| Conread position: | 30-383 |
| Cow position: | chr18:36510095-36510463 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 30-383 |
| Cow position: | chr18:47742984-47743337 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 158 |
| Conread position: | 30-383 |
| Cow position: | chr18:51482337-51482700 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 30-383 |
| Cow position: | chr18:54004694-54004330 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 30-388 |
| Cow position: | chr18:14421761-14422127 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 69 |
| Conread position: | 30-389 |
| Cow position: | chr18:26746832-26747202 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 30-391 |
| Cow position: | chr18:5534489-5534863 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 179 |
| Conread position: | 30-391 |
| Cow position: | chr18:19353845-19354224 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 30-421 |
| Cow position: | chr18:28972406-28972001 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 103, 203 |
| Conread position: | 34-347 |
| Cow position: | chr18:8100934-8100626 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 93 |
| Conread position: | 34-383 |
| Cow position: | chr18:16175136-16174774 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 257 |
| Conread position: | 40-383 |
| Cow position: | chr18:12992586-12992923 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 40-383 |
| Cow position: | chr18:37507449-37507809 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 40-388 |
| Cow position: | chr18:37559028-37559378 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 41-394 |
| Cow position: | chr18:44049184-44049538 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 43-309 |
| Cow position: | chr18:45184774-45185049 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 255 |
| Conread position: | 54-383 |
| Cow position: | chr18:4947457-4947793 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 55-383 |
| Cow position: | chr18:51343186-51343529 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 58-393 |
| Cow position: | chr18:159721-159390 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 70-393 |
| Cow position: | chr18:46884135-46883810 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 145-384 |
| Cow position: | chr18:42516233-42516476 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 199 |
| Conread position: | 156-397 |
| Cow position: | chr18:41647343-41647104 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 158-383 |
| Cow position: | chr18:11273237-11273012 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 102, 151 |
| Conread position: | 158-393 |
| Cow position: | chr18:48469560-48469322 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 173 |
| Conread position: | 165-383 |
| Cow position: | chr18:24714562-24714342 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 140, 98 |
| Conread position: | 166-383 |
| Cow position: | chr18:40482625-40482842 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 171-382 |
| Cow position: | chr18:12186322-12186532 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 145 |
| Conread position: | 174-383 |
| Cow position: | chr18:26741320-26741115 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 203-388 |
| Cow position: | chr18:38346690-38346876 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 35 |
Show alignments to all cow chromosomes.