Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 13-389 |
| Cow position: | chr2:42221335-42220954 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 29-394 |
| Cow position: | chr2:64768267-64767893 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 30-312 |
| Cow position: | chr2:45967106-45966820 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 69, 218 |
| Conread position: | 30-382 |
| Cow position: | chr2:6005919-6005556 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 235 |
| Conread position: | 30-382 |
| Cow position: | chr2:41687694-41688060 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 66, 201 |
| Conread position: | 30-383 |
| Cow position: | chr2:281758-281392 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 200 |
| Conread position: | 30-383 |
| Cow position: | chr2:8119470-8119836 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 213 |
| Conread position: | 30-383 |
| Cow position: | chr2:9958147-9957779 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 293 |
| Conread position: | 30-383 |
| Cow position: | chr2:13044786-13044414 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 267 |
| Conread position: | 30-383 |
| Cow position: | chr2:19012289-19012649 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 30-383 |
| Cow position: | chr2:24925495-24925859 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 212 |
| Conread position: | 30-383 |
| Cow position: | chr2:24926344-24926708 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 212 |
| Conread position: | 30-383 |
| Cow position: | chr2:26904830-26904479 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 142 |
| Conread position: | 30-383 |
| Cow position: | chr2:32065111-32064744 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 30-383 |
| Cow position: | chr2:80291837-80291469 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 205 |
| Conread position: | 30-391 |
| Cow position: | chr2:12696541-12696164 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-391 |
| Cow position: | chr2:28794167-28794550 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 30-391 |
| Cow position: | chr2:50078494-50078863 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 30-391 |
| Cow position: | chr2:50982214-50981843 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 30-391 |
| Cow position: | chr2:65937306-65936923 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 30-392 |
| Cow position: | chr2:85082012-85081649 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 30-407 |
| Cow position: | chr2:49628703-49629076 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 34-384 |
| Cow position: | chr2:32656575-32656929 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 34-387 |
| Cow position: | chr2:3832281-3831933 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 34-393 |
| Cow position: | chr2:39690838-39691206 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 58, 291 |
| Conread position: | 34-393 |
| Cow position: | chr2:62056107-62056451 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 35-324 |
| Cow position: | chr2:1867810-1867530 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 35-383 |
| Cow position: | chr2:32458128-32457766 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 36-389 |
| Cow position: | chr2:72187566-72187199 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 40-286 |
| Cow position: | chr2:49624984-49624733 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 40-379 |
| Cow position: | chr2:15446217-15445885 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 40-383 |
| Cow position: | chr2:47526425-47526075 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 40-383 |
| Cow position: | chr2:72688545-72688901 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 40-388 |
| Cow position: | chr2:63518910-63519262 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 40-392 |
| Cow position: | chr2:11693415-11693775 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 42-383 |
| Cow position: | chr2:52617416-52617769 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 42-393 |
| Cow position: | chr2:10610705-10610338 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 54-316 |
| Cow position: | chr2:44650206-44650474 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 54-333 |
| Cow position: | chr2:16637326-16637602 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 54-388 |
| Cow position: | chr2:7326649-7326996 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 34, 314 |
| Conread position: | 54-549 |
| Cow position: | chr2:74112849-74112362 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 55-383 |
| Cow position: | chr2:25028351-25028012 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 55-390 |
| Cow position: | chr2:246932-246586 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 56-383 |
| Cow position: | chr2:53540887-53541228 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 266 |
| Conread position: | 58-389 |
| Cow position: | chr2:33325211-33324896 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 68-389 |
| Cow position: | chr2:43676818-43677144 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 87-383 |
| Cow position: | chr2:33089059-33089352 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 125-389 |
| Cow position: | chr2:433635-433378 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 53, 91 |
| Conread position: | 152-392 |
| Cow position: | chr2:7318553-7318790 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 165-331 |
| Cow position: | chr2:62815277-62815445 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 165-393 |
| Cow position: | chr2:41181187-41181416 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 209 |
| Conread position: | 166-383 |
| Cow position: | chr2:210966-210746 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 51 |
| Conread position: | 166-383 |
| Cow position: | chr2:11558925-11559143 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 84, 88 |
| Conread position: | 166-387 |
| Cow position: | chr2:37788940-37788715 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 176-378 |
| Cow position: | chr2:13553653-13553856 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-383 |
| Cow position: | chr2:41047943-41047735 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-391 |
| Cow position: | chr2:62729596-62729815 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 176-392 |
| Cow position: | chr2:5869047-5868831 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 185-383 |
| Cow position: | chr2:27084388-27084191 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 187-393 |
| Cow position: | chr2:18663733-18663940 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 193-389 |
| Cow position: | chr2:1108657-1108463 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 432-575 |
| Cow position: | chr2:80291470-80291325 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 122 |
Show alignments to all cow chromosomes.