Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 1-393 |
| Cow position: | chr24:6344384-6344769 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 122 |
| Conread position: | 18-383 |
| Cow position: | chr24:4414080-4413717 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 30-337 |
| Cow position: | chr24:44018979-44019301 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr24:9545526-9545894 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 30-383 |
| Cow position: | chr24:13044157-13043789 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 30-383 |
| Cow position: | chr24:16560843-16560472 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 30-383 |
| Cow position: | chr24:19834875-19835242 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 203 |
| Conread position: | 30-383 |
| Cow position: | chr24:22972533-22972903 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 30-383 |
| Cow position: | chr24:23504389-23504021 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 201 |
| Conread position: | 30-391 |
| Cow position: | chr24:147141-146760 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 34-383 |
| Cow position: | chr24:38585643-38585297 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 40-383 |
| Cow position: | chr24:13233739-13234086 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 56, 301 |
| Conread position: | 40-392 |
| Cow position: | chr24:5776918-5776554 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 41-383 |
| Cow position: | chr24:12334247-12333900 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 43-388 |
| Cow position: | chr24:5887769-5887409 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 43-433 |
| Cow position: | chr24:29352364-29351971 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 48-340 |
| Cow position: | chr24:42584271-42583975 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 199 |
| Conread position: | 51-313 |
| Cow position: | chr24:8753825-8754083 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 54-383 |
| Cow position: | chr24:6963256-6962912 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 54-383 |
| Cow position: | chr24:36298912-36299248 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 54-389 |
| Cow position: | chr24:21072769-21073111 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 55-376 |
| Cow position: | chr24:6060926-6061240 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 55-393 |
| Cow position: | chr24:13512274-13511942 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 70-407 |
| Cow position: | chr24:13322345-13322678 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 85-383 |
| Cow position: | chr24:40469830-40469532 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 87-383 |
| Cow position: | chr24:20286383-20286074 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 99-388 |
| Cow position: | chr24:39405157-39404875 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 149-383 |
| Cow position: | chr24:6353738-6353973 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 154-393 |
| Cow position: | chr24:9769654-9769892 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 167-393 |
| Cow position: | chr24:6198517-6198741 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 171-392 |
| Cow position: | chr24:30865124-30865346 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 172-393 |
| Cow position: | chr24:37199287-37199066 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 173-391 |
| Cow position: | chr24:23094397-23094177 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 173-393 |
| Cow position: | chr24:1493189-1493405 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 116 |
| Conread position: | 185-399 |
| Cow position: | chr24:6272952-6272737 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 188-383 |
| Cow position: | chr24:13086845-13086645 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 163 |
| Conread position: | 206-375 |
| Cow position: | chr24:1098596-1098766 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 134 |
Show alignments to all cow chromosomes.