Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 2-391 |
| Cow position: | chr28:12408817-12408414 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 30-333 |
| Cow position: | chr28:24173351-24173043 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 30-382 |
| Cow position: | chr28:1166459-1166096 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 30-383 |
| Cow position: | chr28:1216401-1216039 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 30-383 |
| Cow position: | chr28:1459525-1459893 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 30-383 |
| Cow position: | chr28:3190822-3190454 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 30-383 |
| Cow position: | chr28:10580443-10580074 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 30-383 |
| Cow position: | chr28:17389832-17390201 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 30-383 |
| Cow position: | chr28:17665877-17665529 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 30-383 |
| Cow position: | chr28:22259720-22259357 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 30-383 |
| Cow position: | chr28:26424828-26424463 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 210 |
| Conread position: | 30-384 |
| Cow position: | chr28:24590287-24590655 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 30-391 |
| Cow position: | chr28:784093-784465 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 30-391 |
| Cow position: | chr28:7827420-7827787 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 34-342 |
| Cow position: | chr28:33384462-33384149 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 215 |
| Conread position: | 34-383 |
| Cow position: | chr28:1506301-1506664 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 34-383 |
| Cow position: | chr28:5938922-5939286 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 34-383 |
| Cow position: | chr28:27679579-27679939 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 58, 191 |
| Conread position: | 34-383 |
| Cow position: | chr28:32790957-32790601 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 166 |
| Conread position: | 34-392 |
| Cow position: | chr28:9715109-9714749 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 35-382 |
| Cow position: | chr28:1954795-1955152 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 42-383 |
| Cow position: | chr28:29821443-29821786 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 73, 8 |
| Conread position: | 51-375 |
| Cow position: | chr28:10645983-10645648 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 54-383 |
| Cow position: | chr28:5750249-5749905 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 178 |
| Conread position: | 54-392 |
| Cow position: | chr28:29337952-29338295 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 55-383 |
| Cow position: | chr28:34526448-34526119 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 59-383 |
| Cow position: | chr28:9288409-9288745 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 166-383 |
| Cow position: | chr28:7059088-7058870 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 171-431 |
| Cow position: | chr28:22457358-22457616 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 85, 118 |
| Conread position: | 176-383 |
| Cow position: | chr28:31591149-31591357 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.