Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 30-339 |
| Cow position: | chr29:16661402-16661715 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 53 |
| Conread position: | 30-382 |
| Cow position: | chr29:34798417-34798051 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 300 |
| Conread position: | 30-383 |
| Cow position: | chr29:2691557-2691924 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 30-383 |
| Cow position: | chr29:6264606-6264237 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 263 |
| Conread position: | 30-383 |
| Cow position: | chr29:7845784-7846152 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr29:10022938-10022570 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr29:10822522-10822156 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 200 |
| Conread position: | 30-383 |
| Cow position: | chr29:13583475-13583843 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 30-383 |
| Cow position: | chr29:16345608-16345973 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 30-383 |
| Cow position: | chr29:19526892-19526524 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr29:19655018-19655380 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 30-383 |
| Cow position: | chr29:26163440-26163074 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 235 |
| Conread position: | 30-383 |
| Cow position: | chr29:27180359-27179991 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 30-383 |
| Cow position: | chr29:31182802-31183164 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr29:45461141-45461508 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 30-390 |
| Cow position: | chr29:4633230-4632871 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 30-391 |
| Cow position: | chr29:21431457-21431082 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 30-392 |
| Cow position: | chr29:647208-647578 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 106 |
| Conread position: | 34-383 |
| Cow position: | chr29:27979522-27979159 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 56, 190 |
| Conread position: | 34-392 |
| Cow position: | chr29:44601199-44600848 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 34-394 |
| Cow position: | chr29:37165491-37165851 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 35-383 |
| Cow position: | chr29:409849-409500 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 40-316 |
| Cow position: | chr29:23905240-23905509 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 40-370 |
| Cow position: | chr29:24335596-24335254 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 40-375 |
| Cow position: | chr29:35298314-35298664 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 283 |
| Conread position: | 40-383 |
| Cow position: | chr29:23977527-23977885 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 40-393 |
| Cow position: | chr29:31547271-31546912 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 48-409 |
| Cow position: | chr29:9877098-9876721 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 195 |
| Conread position: | 54-383 |
| Cow position: | chr29:43324937-43325279 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 273 |
| Conread position: | 54-389 |
| Cow position: | chr29:3176019-3175684 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 19 |
| Conread position: | 112-392 |
| Cow position: | chr29:40612388-40612103 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 176-383 |
| Cow position: | chr29:609094-608886 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 176-383 |
| Cow position: | chr29:36634829-36634622 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 176-391 |
| Cow position: | chr29:42204651-42204867 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 183-392 |
| Cow position: | chr29:26215843-26216047 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 211-383 |
| Cow position: | chr29:2073697-2073870 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.