Cow genome map

Conread name: LyN1-MLN01D100072

Conread position: 18-388
Cow position: chr3:79122301-79121926 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 75, 7

Conread position: 30-382
Cow position: chr3:36877342-36876983 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 30-382
Cow position: chr3:64016055-64015706 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 228
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 118

Conread position: 30-383
Cow position: chr3:595446-595804 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 30-383
Cow position: chr3:1742641-1743009 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:2368027-2367661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 265

Conread position: 30-383
Cow position: chr3:2709557-2709192 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 88

Conread position: 30-383
Cow position: chr3:2870098-2870466 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:2918779-2919142 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:4287399-4287764 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:5993770-5993410 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 189

Conread position: 30-383
Cow position: chr3:16224195-16224563 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr3:20382338-20382713 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 210

Conread position: 30-383
Cow position: chr3:23289024-23288656 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 192

Conread position: 30-383
Cow position: chr3:24644534-24644891 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 130, 36

Conread position: 30-383
Cow position: chr3:29575814-29575446 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 30-383
Cow position: chr3:30315859-30316225 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 33

Conread position: 30-383
Cow position: chr3:40824702-40825070 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 200

Conread position: 30-383
Cow position: chr3:64651947-64652286 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 230, 67

Conread position: 30-383
Cow position: chr3:68698663-68698297 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 272

Conread position: 30-383
Cow position: chr3:68891260-68890899 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 85

Conread position: 30-383
Cow position: chr3:72631376-72631734 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 62

Conread position: 30-383
Cow position: chr3:78026103-78025744 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 322

Conread position: 30-384
Cow position: chr3:48058051-48057682 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 202

Conread position: 30-387
Cow position: chr3:82638405-82638773 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 101, 54

Conread position: 30-391
Cow position: chr3:3524325-3524700 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 67

Conread position: 30-391
Cow position: chr3:5952871-5952498 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 44

Conread position: 30-391
Cow position: chr3:6783677-6784054 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 30-391
Cow position: chr3:37970356-37970734 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 30-391
Cow position: chr3:44925372-44925752 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 256

Conread position: 34-383
Cow position: chr3:7313160-7312799 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 106

Conread position: 34-383
Cow position: chr3:56100367-56100010 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 32

Conread position: 34-392
Cow position: chr3:19799858-19799492 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 35-383
Cow position: chr3:34506029-34505675 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 64

Conread position: 40-383
Cow position: chr3:3840197-3839840 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 231

Conread position: 40-383
Cow position: chr3:24457865-24457503 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 204

Conread position: 40-383
Cow position: chr3:45034059-45034417 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 40-383
Cow position: chr3:57483403-57483048 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 53

Conread position: 40-395
Cow position: chr3:62503445-62503813 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 254

Conread position: 41-285
Cow position: chr3:65207900-65207643 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 56

Conread position: 48-383
Cow position: chr3:54291251-54290904 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 60

Conread position: 54-383
Cow position: chr3:23206540-23206198 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 269

Conread position: 54-383
Cow position: chr3:36863124-36862780 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 54-383
Cow position: chr3:37626331-37626659 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 66

Conread position: 54-383
Cow position: chr3:56295520-56295863 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 51

Conread position: 54-391
Cow position: chr3:19720324-19719972 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 299

Conread position: 57-382
Cow position: chr3:19945581-19945927 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 70-431
Cow position: chr3:72163628-72163257 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 235
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 141

Conread position: 84-383
Cow position: chr3:53516975-53517287 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 84-393
Cow position: chr3:45983060-45982743 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 228

Conread position: 91-390
Cow position: chr3:70197593-70197911 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 281

Conread position: 109-393
Cow position: chr3:63946535-63946818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 37

Conread position: 114-338
Cow position: chr3:42053273-42053046 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 27

Conread position: 124-390
Cow position: chr3:57979000-57978737 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 15

Conread position: 155-393
Cow position: chr3:71205876-71206114 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 11

Conread position: 158-378
Cow position: chr3:31319813-31320029 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 73

Conread position: 158-389
Cow position: chr3:23944085-23943854 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 32

Conread position: 162-383
Cow position: chr3:58784700-58784478 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 166-383
Cow position: chr3:21028158-21027940 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 94, 150

Conread position: 166-383
Cow position: chr3:43191832-43191614 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 166-383
Cow position: chr3:51857231-51857013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 88

Conread position: 166-392
Cow position: chr3:8438500-8438719 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 150

Conread position: 171-393
Cow position: chr3:58167140-58167363 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 171-393
Cow position: chr3:69099375-69099156 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 171-393
Cow position: chr3:78908522-78908302 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 46

Conread position: 176-391
Cow position: chr3:19940400-19940615 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 93

Conread position: 185-316
Cow position: chr3:12689194-12689060 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 114

Conread position: 185-391
Cow position: chr3:4736447-4736242 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 106

Show alignments to all cow chromosomes.