Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 29-267 |
| Cow position: | chr4:47486428-47486678 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 30-281 |
| Cow position: | chr4:37322-37070 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 115 |
| Conread position: | 30-336 |
| Cow position: | chr4:20804692-20804988 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 30-383 |
| Cow position: | chr4:9355495-9355860 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 30-383 |
| Cow position: | chr4:14386934-14387303 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr4:17502218-17501850 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr4:17924848-17924480 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 215 |
| Conread position: | 30-383 |
| Cow position: | chr4:18423403-18423041 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 287 |
| Conread position: | 30-383 |
| Cow position: | chr4:25598372-25598005 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 292 |
| Conread position: | 30-383 |
| Cow position: | chr4:28653379-28653014 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr4:43882223-43882583 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 30-383 |
| Cow position: | chr4:57985105-57985472 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 215 |
| Conread position: | 30-383 |
| Cow position: | chr4:67682310-67682679 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 30-384 |
| Cow position: | chr4:952062-952419 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 30-390 |
| Cow position: | chr4:42405725-42406103 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 30-392 |
| Cow position: | chr4:30472326-30472703 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 31-383 |
| Cow position: | chr4:65665280-65664931 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 34-354 |
| Cow position: | chr4:38930507-38930836 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 34-382 |
| Cow position: | chr4:44780103-44779741 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 208 |
| Conread position: | 34-383 |
| Cow position: | chr4:52963015-52962655 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 127, 43 |
| Conread position: | 34-393 |
| Cow position: | chr4:47462939-47463305 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 54, 195 |
| Conread position: | 40-340 |
| Cow position: | chr4:6614997-6614689 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 172 |
| Conread position: | 40-382 |
| Cow position: | chr4:43672633-43672982 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 40-383 |
| Cow position: | chr4:1929512-1929161 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 40-383 |
| Cow position: | chr4:16060402-16060760 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 42-338 |
| Cow position: | chr4:46200597-46200295 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 43-316 |
| Cow position: | chr4:13871110-13871382 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 49-389 |
| Cow position: | chr4:54152476-54152129 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 54-383 |
| Cow position: | chr4:26876644-26876307 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 72, 157 |
| Conread position: | 54-383 |
| Cow position: | chr4:33071697-33071358 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 267 |
| Conread position: | 55-382 |
| Cow position: | chr4:22027314-22026974 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 55-383 |
| Cow position: | chr4:6865369-6865027 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 60-383 |
| Cow position: | chr4:4417200-4417532 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 168 |
| Conread position: | 89-383 |
| Cow position: | chr4:67651106-67650803 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 297 |
| Conread position: | 108-389 |
| Cow position: | chr4:65041437-65041148 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 142-393 |
| Cow position: | chr4:12459330-12459083 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 166-378 |
| Cow position: | chr4:17244369-17244582 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 166-393 |
| Cow position: | chr4:13266548-13266324 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 166-393 |
| Cow position: | chr4:13958433-13958662 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 171-392 |
| Cow position: | chr4:68837730-68837507 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 173-392 |
| Cow position: | chr4:37949599-37949368 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 176-383 |
| Cow position: | chr4:530691-530899 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 176-383 |
| Cow position: | chr4:6267918-6267710 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 133 |
| Conread position: | 176-392 |
| Cow position: | chr4:49939159-49938942 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 147 |
| Conread position: | 185-383 |
| Cow position: | chr4:827490-827689 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 186-375 |
| Cow position: | chr4:29299137-29299319 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 196-333 |
| Cow position: | chr4:30978520-30978386 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 432-575 |
| Cow position: | chr4:57985471-57985617 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.