Cow genome map
| Conread name: | LyN1-MLN01D100072 |
| Conread position: | 26-383 |
| Cow position: | chr8:51068371-51067999 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 29-383 |
| Cow position: | chr8:2235346-2234981 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 135, 64 |
| Conread position: | 30-374 |
| Cow position: | chr8:47490119-47490468 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 130, 47 |
| Conread position: | 30-375 |
| Cow position: | chr8:7162528-7162887 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 201 |
| Conread position: | 30-381 |
| Cow position: | chr8:25377609-25377973 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 107 |
| Conread position: | 30-382 |
| Cow position: | chr8:2887383-2887749 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 30-383 |
| Cow position: | chr8:1347620-1347252 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 30-383 |
| Cow position: | chr8:3786261-3786628 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 30-383 |
| Cow position: | chr8:14590248-14589879 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 30-383 |
| Cow position: | chr8:34109511-34109876 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 252 |
| Conread position: | 30-383 |
| Cow position: | chr8:34349301-34349669 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr8:37655925-37655557 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 30-383 |
| Cow position: | chr8:38392258-38392624 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 30-383 |
| Cow position: | chr8:39820082-39820450 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 238 |
| Conread position: | 30-384 |
| Cow position: | chr8:50959979-50959614 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 30-389 |
| Cow position: | chr8:18054359-18054735 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 30-389 |
| Cow position: | chr8:24914689-24914316 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 30-391 |
| Cow position: | chr8:39194583-39194203 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 30-392 |
| Cow position: | chr8:37932726-37933103 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 30-393 |
| Cow position: | chr8:33091397-33091766 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 34-382 |
| Cow position: | chr8:19332208-19332570 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 34-383 |
| Cow position: | chr8:12450678-12451039 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 288 |
| Conread position: | 34-383 |
| Cow position: | chr8:35470936-35471300 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 34-383 |
| Cow position: | chr8:59261305-59260950 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 34-384 |
| Cow position: | chr8:41247810-41248169 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 34-394 |
| Cow position: | chr8:25524034-25524404 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 35-304 |
| Cow position: | chr8:14583340-14583074 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 35-336 |
| Cow position: | chr8:42154643-42154324 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 40-317 |
| Cow position: | chr8:14348120-14347844 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 40-393 |
| Cow position: | chr8:7399455-7399110 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 43-381 |
| Cow position: | chr8:30486758-30486415 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 183 |
| Conread position: | 43-383 |
| Cow position: | chr8:47947735-47948085 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 45-367 |
| Cow position: | chr8:32522613-32522948 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 53-389 |
| Cow position: | chr8:27718554-27718899 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 54-375 |
| Cow position: | chr8:5017837-5018168 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 54-383 |
| Cow position: | chr8:8516943-8516600 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 54-383 |
| Cow position: | chr8:13492013-13492351 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 54-383 |
| Cow position: | chr8:41644034-41643688 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 55-383 |
| Cow position: | chr8:30155757-30156099 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 55-383 |
| Cow position: | chr8:36920018-36920349 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 55-383 |
| Cow position: | chr8:47068161-47067818 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 89-393 |
| Cow position: | chr8:37093828-37093515 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 158-383 |
| Cow position: | chr8:9757185-9757408 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 158-383 |
| Cow position: | chr8:11776389-11776616 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 158-383 |
| Cow position: | chr8:42440178-42439952 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 158-383 |
| Cow position: | chr8:44108916-44109143 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 158-389 |
| Cow position: | chr8:3227113-3226885 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 166-383 |
| Cow position: | chr8:11565528-11565746 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 166-383 |
| Cow position: | chr8:25774868-25774649 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 169-382 |
| Cow position: | chr8:44700766-44700979 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 172-301 |
| Cow position: | chr8:26911819-26911689 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 173-347 |
| Cow position: | chr8:33456915-33457082 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 173-379 |
| Cow position: | chr8:42870667-42870864 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 174-382 |
| Cow position: | chr8:46217966-46217758 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 142 |
| Conread position: | 187-392 |
| Cow position: | chr8:24190767-24190973 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.