Cow genome map
Conread name: | LyN1-MLN01D110012 |
Conread position: | 8-512 |
Cow position: | chr1:99824746-99825271 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 6 |
Conread position: | 17-509 |
Cow position: | chr1:93443476-93443984 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 284 |
Conread position: | 24-513 |
Cow position: | chr1:38110356-38110861 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 61 |
Conread position: | 28-260 |
Cow position: | chr1:20969576-20969812 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 180 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 181, 218 |
Conread position: | 28-334 |
Cow position: | chr1:87120515-87120827 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 212 |
Conread position: | 28-509 |
Cow position: | chr1:68371837-68371350 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 325 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 78, 82 |
Conread position: | 29-146 |
Cow position: | chr1:15754153-15754036 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-511 |
Cow position: | chr1:93247290-93247781 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 23 |
Conread position: | 30-512 |
Cow position: | chr1:19557863-19558347 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 144 |
Conread position: | 30-514 |
Cow position: | chr1:14663248-14662750 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 261 |
Conread position: | 31-334 |
Cow position: | chr1:92386636-92386340 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 190 |
Conread position: | 31-512 |
Cow position: | chr1:28653468-28653955 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 190 |
Conread position: | 31-512 |
Cow position: | chr1:85847559-85847099 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 330 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 182, 66 |
Conread position: | 31-513 |
Cow position: | chr1:4787471-4787958 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 86 |
Conread position: | 32-510 |
Cow position: | chr1:12018614-12018125 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 300 |
Conread position: | 33-498 |
Cow position: | chr1:90816366-90815892 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 89 |
Conread position: | 33-510 |
Cow position: | chr1:89080885-89081375 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 292 |
Conread position: | 33-511 |
Cow position: | chr1:51764863-51764374 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 263 |
Conread position: | 33-512 |
Cow position: | chr1:77374660-77375149 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 264 |
Conread position: | 34-260 |
Cow position: | chr1:19974867-19974633 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 19, 90 |
Conread position: | 34-473 |
Cow position: | chr1:59393503-59393948 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 308 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 33, 131 |
Conread position: | 34-512 |
Cow position: | chr1:33458547-33458041 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 333 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 118, 81 |
Conread position: | 34-512 |
Cow position: | chr1:44187069-44187535 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 180 |
Conread position: | 35-509 |
Cow position: | chr1:37915947-37915466 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 11 |
Conread position: | 35-509 |
Cow position: | chr1:62220772-62221254 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 256 |
Conread position: | 35-509 |
Cow position: | chr1:94762475-94762960 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 321 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 84, 25 |
Conread position: | 36-498 |
Cow position: | chr1:51056334-51056791 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 251 |
Conread position: | 36-509 |
Cow position: | chr1:4190209-4190694 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 337 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 115, 132 |
Conread position: | 36-509 |
Cow position: | chr1:15205322-15205805 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 333 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 36, 87 |
Conread position: | 36-509 |
Cow position: | chr1:17904039-17904516 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 13 |
Conread position: | 36-509 |
Cow position: | chr1:87741103-87741585 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 85 |
Conread position: | 36-510 |
Cow position: | chr1:30083872-30083408 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 322 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 18, 106 |
Conread position: | 36-510 |
Cow position: | chr1:68374510-68374026 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 260 |
Conread position: | 36-539 |
Cow position: | chr1:55332361-55332886 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 196 |
Conread position: | 37-176 |
Cow position: | chr1:84247059-84246922 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 37-192 |
Cow position: | chr1:3446225-3446068 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 37-215 |
Cow position: | chr1:17423126-17422951 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 139 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 37-260 |
Cow position: | chr1:83321213-83320994 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 179, 79 |
Conread position: | 37-276 |
Cow position: | chr1:42167447-42167207 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 199, 129 |
Conread position: | 37-334 |
Cow position: | chr1:28736560-28736277 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 0 |
Conread position: | 37-334 |
Cow position: | chr1:96088613-96088905 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 22, 45 |
Conread position: | 37-476 |
Cow position: | chr1:83146748-83146295 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 133 |
Conread position: | 37-496 |
Cow position: | chr1:15123472-15123936 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 309 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 178, 146 |
Conread position: | 37-498 |
Cow position: | chr1:39287976-39287507 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 254 |
Conread position: | 37-498 |
Cow position: | chr1:85058784-85058339 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 184 |
Conread position: | 37-504 |
Cow position: | chr1:27873554-27873085 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 331 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 292, 56 |
Conread position: | 37-508 |
Cow position: | chr1:62401747-62401276 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 184 |
Conread position: | 37-508 |
Cow position: | chr1:75437706-75437226 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 293 |
Conread position: | 37-509 |
Cow position: | chr1:25393172-25392703 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 184 |
Conread position: | 37-509 |
Cow position: | chr1:26948223-26948706 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 295 |
Conread position: | 37-509 |
Cow position: | chr1:61157986-61157507 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 321 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 12, 110 |
Conread position: | 37-509 |
Cow position: | chr1:62445173-62444693 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 254 |
Conread position: | 37-509 |
Cow position: | chr1:64751892-64752379 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 262 |
Conread position: | 37-509 |
Cow position: | chr1:65933646-65933167 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 254 |
Conread position: | 37-509 |
Cow position: | chr1:70162292-70161812 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 81 |
Conread position: | 37-509 |
Cow position: | chr1:73690655-73690172 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 275 |
Conread position: | 37-509 |
Cow position: | chr1:74010107-74009639 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 12 |
Conread position: | 37-509 |
Cow position: | chr1:94026703-94027189 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 84 |
Conread position: | 37-510 |
Cow position: | chr1:11319503-11319019 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 288 |
Conread position: | 37-510 |
Cow position: | chr1:80624708-80624228 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 12 |
Conread position: | 38-197 |
Cow position: | chr1:34356997-34356838 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-473 |
Cow position: | chr1:93128365-93128804 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 115 |
Conread position: | 39-219 |
Cow position: | chr1:13557939-13558119 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 144 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 39-258 |
Cow position: | chr1:64757073-64757295 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 170 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 176, 143 |
Conread position: | 39-266 |
Cow position: | chr1:94019569-94019803 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 176, 201 |
Conread position: | 39-504 |
Cow position: | chr1:8046440-8046918 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 322 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 202, 182 |
Conread position: | 39-509 |
Cow position: | chr1:64746982-64747470 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 84 |
Conread position: | 39-509 |
Cow position: | chr1:67850746-67850265 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 257 |
Conread position: | 44-260 |
Cow position: | chr1:32452559-32452333 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 165 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 12, 144 |
Conread position: | 51-264 |
Cow position: | chr1:21817724-21817508 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 164, 67 |
Conread position: | 59-509 |
Cow position: | chr1:15197318-15197779 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 309 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 13, 64 |
Conread position: | 61-260 |
Cow position: | chr1:75439943-75440143 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 156 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 64-334 |
Cow position: | chr1:82664126-82663848 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 64-509 |
Cow position: | chr1:58203979-58203529 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 297 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 151, 204 |
Conread position: | 75-215 |
Cow position: | chr1:4313107-4313244 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 114 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 82-512 |
Cow position: | chr1:94765614-94765165 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 291 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 133, 305 |
Conread position: | 94-311 |
Cow position: | chr1:8149192-8148974 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 121, 47 |
Conread position: | 119-476 |
Cow position: | chr1:6314533-6314169 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 96, 121 |
Conread position: | 122-260 |
Cow position: | chr1:62039691-62039835 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 124-334 |
Cow position: | chr1:41182639-41182420 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 169 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 126-264 |
Cow position: | chr1:9711590-9711734 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 166-332 |
Cow position: | chr1:67968231-67968058 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 329-447 |
Cow position: | chr1:3446018-3445898 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 361-515 |
Cow position: | chr1:67967998-67967830 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 362-509 |
Cow position: | chr1:41182358-41182214 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 43, 112 |
Conread position: | 362-509 |
Cow position: | chr1:82663785-82663636 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 362-512 |
Cow position: | chr1:87120889-87121041 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 363-509 |
Cow position: | chr1:32451165-32451017 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.