Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 18-334 |
| Cow position: | chr10:44316470-44316788 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 66 |
| Conread position: | 22-431 |
| Cow position: | chr10:52418898-52419318 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 264 |
| Conread position: | 24-264 |
| Cow position: | chr10:21669001-21669245 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 191, 95 |
| Conread position: | 27-503 |
| Cow position: | chr10:33845573-33846064 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 194, 57 |
| Conread position: | 28-510 |
| Cow position: | chr10:53484698-53485157 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 18 |
| Conread position: | 29-182 |
| Cow position: | chr10:35130368-35130220 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 29-263 |
| Cow position: | chr10:33481662-33481428 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-511 |
| Cow position: | chr10:14643481-14643959 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 50 |
| Conread position: | 30-509 |
| Cow position: | chr10:15173249-15172762 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 31 |
| Conread position: | 30-509 |
| Cow position: | chr10:68822414-68821930 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 256 |
| Conread position: | 30-512 |
| Cow position: | chr10:66618145-66618636 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 69 |
| Conread position: | 31-287 |
| Cow position: | chr10:33715847-33716097 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 184, 79 |
| Conread position: | 31-334 |
| Cow position: | chr10:14425316-14425605 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 31-513 |
| Cow position: | chr10:46749516-46749023 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 260 |
| Conread position: | 32-158 |
| Cow position: | chr10:50725838-50725964 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-514 |
| Cow position: | chr10:57426306-57426798 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 34-244 |
| Cow position: | chr10:19972169-19972383 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 175, 20 |
| Conread position: | 34-251 |
| Cow position: | chr10:30427789-30428004 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 181, 67 |
| Conread position: | 34-259 |
| Cow position: | chr10:53976526-53976756 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 187, 217 |
| Conread position: | 34-264 |
| Cow position: | chr10:6228949-6229186 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 34-504 |
| Cow position: | chr10:6603773-6603286 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 35-190 |
| Cow position: | chr10:15438628-15438783 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 35-435 |
| Cow position: | chr10:27773762-27774167 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 256 |
| Conread position: | 35-517 |
| Cow position: | chr10:18044250-18043760 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 118 |
| Conread position: | 36-334 |
| Cow position: | chr10:52426130-52426428 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 223 |
| Conread position: | 36-514 |
| Cow position: | chr10:33154998-33155485 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 255 |
| Conread position: | 36-528 |
| Cow position: | chr10:13339442-13339946 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 82 |
| Conread position: | 37-453 |
| Cow position: | chr10:37052247-37052688 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 278 |
| Conread position: | 37-498 |
| Cow position: | chr10:36757817-36758283 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 21 |
| Conread position: | 37-502 |
| Cow position: | chr10:25639048-25639516 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 171 |
| Conread position: | 37-504 |
| Cow position: | chr10:53108339-53108823 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 179, 96 |
| Conread position: | 37-509 |
| Cow position: | chr10:19974541-19974068 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 167 |
| Conread position: | 37-509 |
| Cow position: | chr10:32880654-32881137 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 294 |
| Conread position: | 37-509 |
| Cow position: | chr10:52671073-52671566 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 254 |
| Conread position: | 37-510 |
| Cow position: | chr10:4541777-4542249 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 37-522 |
| Cow position: | chr10:9563136-9563615 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 37-525 |
| Cow position: | chr10:32746544-32747039 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 81 |
| Conread position: | 38-264 |
| Cow position: | chr10:34165233-34165465 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 38-334 |
| Cow position: | chr10:28227929-28228222 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 35 |
| Conread position: | 38-514 |
| Cow position: | chr10:50577259-50577747 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 184 |
| Conread position: | 39-508 |
| Cow position: | chr10:15394955-15395432 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 41-275 |
| Cow position: | chr10:69233974-69234207 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 43-457 |
| Cow position: | chr10:27376109-27375677 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 241 |
| Conread position: | 49-512 |
| Cow position: | chr10:55346569-55346103 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 56-264 |
| Cow position: | chr10:69647142-69646930 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 59-509 |
| Cow position: | chr10:53900643-53901078 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 73-512 |
| Cow position: | chr10:25943595-25944044 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 218 |
| Conread position: | 75-513 |
| Cow position: | chr10:17857204-17856764 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 76-287 |
| Cow position: | chr10:10110301-10110517 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 91-334 |
| Cow position: | chr10:44981685-44981435 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 119-507 |
| Cow position: | chr10:59336389-59336790 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 362-522 |
| Cow position: | chr10:28228337-28228497 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 366-519 |
| Cow position: | chr10:44316855-44317007 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 71, 40 |
Show alignments to all cow chromosomes.