Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 13-513 |
| Cow position: | chr13:41895307-41895814 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 8 |
| Conread position: | 19-512 |
| Cow position: | chr13:3005289-3005794 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 272 |
| Conread position: | 27-509 |
| Cow position: | chr13:54071038-54070548 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 268 |
| Conread position: | 29-260 |
| Cow position: | chr13:17564024-17564261 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 29-270 |
| Cow position: | chr13:19195309-19195554 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 157, 55 |
| Conread position: | 31-513 |
| Cow position: | chr13:60620243-60620728 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 87 |
| Conread position: | 33-202 |
| Cow position: | chr13:10377276-10377112 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 33-260 |
| Cow position: | chr13:48188239-48188013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 41, 188 |
| Conread position: | 33-514 |
| Cow position: | chr13:42038620-42038122 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 261 |
| Conread position: | 34-154 |
| Cow position: | chr13:27944851-27944970 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 34-498 |
| Cow position: | chr13:14728009-14727564 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 179 |
| Conread position: | 34-509 |
| Cow position: | chr13:57251547-57252024 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 252 |
| Conread position: | 34-512 |
| Cow position: | chr13:26714221-26713730 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 300 |
| Conread position: | 34-513 |
| Cow position: | chr13:35519510-35520000 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 257 |
| Conread position: | 34-514 |
| Cow position: | chr13:20687322-20686828 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 265 |
| Conread position: | 35-498 |
| Cow position: | chr13:37451462-37451925 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 264 |
| Conread position: | 36-273 |
| Cow position: | chr13:43706494-43706254 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 179, 26 |
| Conread position: | 36-498 |
| Cow position: | chr13:22789553-22789092 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 105 |
| Conread position: | 36-510 |
| Cow position: | chr13:42720717-42721177 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 82 |
| Conread position: | 36-512 |
| Cow position: | chr13:49097689-49097206 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 200 |
| Conread position: | 37-187 |
| Cow position: | chr13:2361492-2361641 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 37-212 |
| Cow position: | chr13:62674722-62674547 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-219 |
| Cow position: | chr13:33242818-33243000 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-260 |
| Cow position: | chr13:19680806-19681030 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 178, 111 |
| Conread position: | 37-270 |
| Cow position: | chr13:12400750-12400511 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-334 |
| Cow position: | chr13:23592162-23591874 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 37-509 |
| Cow position: | chr13:1021803-1021320 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-509 |
| Cow position: | chr13:7548996-7548513 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 259 |
| Conread position: | 37-509 |
| Cow position: | chr13:10806045-10806527 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 215 |
| Conread position: | 37-509 |
| Cow position: | chr13:12538656-12538173 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 259 |
| Conread position: | 37-509 |
| Cow position: | chr13:18438872-18438412 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 229, 177 |
| Conread position: | 37-509 |
| Cow position: | chr13:24840668-24841144 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 37-509 |
| Cow position: | chr13:42030984-42031458 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 255 |
| Conread position: | 37-509 |
| Cow position: | chr13:48439316-48438836 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 253 |
| Conread position: | 37-510 |
| Cow position: | chr13:58460200-58460657 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 183, 91 |
| Conread position: | 37-511 |
| Cow position: | chr13:17472547-17472062 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 259 |
| Conread position: | 37-512 |
| Cow position: | chr13:51890694-51891182 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 37-514 |
| Cow position: | chr13:40218535-40218047 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 288 |
| Conread position: | 37-516 |
| Cow position: | chr13:48618552-48619043 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 33 |
| Conread position: | 38-508 |
| Cow position: | chr13:62147923-62147456 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 115 |
| Conread position: | 39-505 |
| Cow position: | chr13:15723409-15723891 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 174, 5 |
| Conread position: | 40-448 |
| Cow position: | chr13:32726199-32725786 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 43-476 |
| Cow position: | chr13:38393411-38393858 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 281 |
| Conread position: | 52-265 |
| Cow position: | chr13:3081281-3081498 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 150, 43 |
| Conread position: | 58-509 |
| Cow position: | chr13:51596137-51596598 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 23 |
| Conread position: | 66-513 |
| Cow position: | chr13:54720808-54721264 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 306 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 141, 69 |
| Conread position: | 106-467 |
| Cow position: | chr13:32843039-32843419 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 177 |
Show alignments to all cow chromosomes.