Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 1-509 |
| Cow position: | chr14:27964853-27965358 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 5-334 |
| Cow position: | chr14:15754385-15754722 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 132 |
| Conread position: | 30-264 |
| Cow position: | chr14:21315614-21315840 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 30-502 |
| Cow position: | chr14:27731700-27732194 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 274 |
| Conread position: | 32-265 |
| Cow position: | chr14:20670472-20670706 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 32-527 |
| Cow position: | chr14:43839677-43839184 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 72 |
| Conread position: | 33-512 |
| Cow position: | chr14:22649754-22650242 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 34-271 |
| Cow position: | chr14:49754277-49754036 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 188, 149 |
| Conread position: | 34-509 |
| Cow position: | chr14:20735617-20736092 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 186, 62 |
| Conread position: | 34-528 |
| Cow position: | chr14:11143243-11142738 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 298 |
| Conread position: | 35-257 |
| Cow position: | chr14:46395816-46396040 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 184, 100 |
| Conread position: | 35-260 |
| Cow position: | chr14:34389425-34389647 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 186, 118 |
| Conread position: | 35-513 |
| Cow position: | chr14:48579596-48579102 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 233, 85 |
| Conread position: | 36-509 |
| Cow position: | chr14:12334751-12334267 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 36-509 |
| Cow position: | chr14:12356781-12357266 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 260 |
| Conread position: | 36-510 |
| Cow position: | chr14:24208128-24208608 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 8 |
| Conread position: | 36-510 |
| Cow position: | chr14:35326484-35326967 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 37-219 |
| Cow position: | chr14:48565981-48565807 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 37-259 |
| Cow position: | chr14:36456439-36456215 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 81, 181 |
| Conread position: | 37-265 |
| Cow position: | chr14:20670825-20670596 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 37-334 |
| Cow position: | chr14:2335868-2336152 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 185 |
| Conread position: | 37-504 |
| Cow position: | chr14:36601791-36602250 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 321 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 37-504 |
| Cow position: | chr14:40069601-40070065 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 184 |
| Conread position: | 37-509 |
| Cow position: | chr14:21346935-21347412 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 258 |
| Conread position: | 37-509 |
| Cow position: | chr14:23934867-23935349 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 260 |
| Conread position: | 37-509 |
| Cow position: | chr14:31352702-31352222 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-509 |
| Cow position: | chr14:37835843-37836312 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 124 |
| Conread position: | 37-509 |
| Cow position: | chr14:38884844-38885328 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 260 |
| Conread position: | 37-510 |
| Cow position: | chr14:8808437-8807957 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 291 |
| Conread position: | 38-506 |
| Cow position: | chr14:2271779-2272253 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 40-297 |
| Cow position: | chr14:33157983-33157734 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 236, 79 |
| Conread position: | 42-273 |
| Cow position: | chr14:45502675-45502909 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 69 |
| Conread position: | 43-260 |
| Cow position: | chr14:26865026-26865245 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 173, 15 |
| Conread position: | 44-324 |
| Cow position: | chr14:27936905-27937183 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 176, 109 |
| Conread position: | 50-509 |
| Cow position: | chr14:3557948-3558424 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 51-509 |
| Cow position: | chr14:43170313-43170774 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 170 |
| Conread position: | 52-509 |
| Cow position: | chr14:47194439-47193973 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 315 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 94, 280 |
| Conread position: | 72-509 |
| Cow position: | chr14:40150628-40150184 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 89 |
| Conread position: | 109-334 |
| Cow position: | chr14:3512520-3512309 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 124-311 |
| Cow position: | chr14:29173031-29172840 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 32 |
Show alignments to all cow chromosomes.